| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103487263
Identifier: 103487263
GI number: 103487263
Start: 1875290
End: 1875520
Strand: Direct
Name: 103487263
Synonym: Sala_1778
Alternate gene names: NA
Gene position: 1875290-1875520 (Clockwise)
Preceding gene: 103487262
Following gene: 103487265
Centisome position: 56.06
GC content: 64.07
Gene sequence:
>231_bases ATGACCGAAAAGAAAAAAGAAAAACTCCTGATCCTCAGCCAGCCGCAGCGCGCCTGCCTGGAGGGCCTGTCGAACCGCCG CCCCCAACTCCCCACCGATCCCGTCCGCGACGAACTCACCGCGCTGGGGCTGGTGGTGAAACAGGGCGCCAAATGGGCGC TGACCCCGCAGGGCAAGAAGGTGCTGGCGGCAAGCTCGAACCGGCGCAATGCGGGCGGTTTTTCGGTTTGA
Upstream 100 bases:
>100_bases GGGGGAGGGGCAGCGAAGCTTGCCAGCTTGCTGGCATAGCGAAGCGGGGTGGGGGCTCACGGCCTGAAACAATGATCGAA AAGAAAAGCCAGAGGCCAGA
Downstream 100 bases:
>100_bases GGGAATTGCCGCGCCGATACGTCGCGTAACGGCTTGACGCCTTTCGATAGCTAGGGTCCAAACTCAATCAGCCTCTTGAA AATCGGCGCGCACATTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTEKKKEKLLILSQPQRACLEGLSNRRPQLPTDPVRDELTALGLVVKQGAKWALTPQGKKVLAASSNRRNAGGFSV
Sequences:
>Translated_76_residues MTEKKKEKLLILSQPQRACLEGLSNRRPQLPTDPVRDELTALGLVVKQGAKWALTPQGKKVLAASSNRRNAGGFSV >Mature_75_residues TEKKKEKLLILSQPQRACLEGLSNRRPQLPTDPVRDELTALGLVVKQGAKWALTPQGKKVLAASSNRRNAGGFSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8297; Mature: 8166
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKKKEKLLILSQPQRACLEGLSNRRPQLPTDPVRDELTALGLVVKQGAKWALTPQGKK CCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCE VLAASSNRRNAGGFSV EEEECCCCCCCCCCCC >Mature Secondary Structure TEKKKEKLLILSQPQRACLEGLSNRRPQLPTDPVRDELTALGLVVKQGAKWALTPQGKK CCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCE VLAASSNRRNAGGFSV EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA