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The map label for this gene is chrC [H]

Identifier: 103487265

GI number: 103487265

Start: 1878170

End: 1878889

Strand: Direct

Name: chrC [H]

Synonym: Sala_1781

Alternate gene names: 103487265

Gene position: 1878170-1878889 (Clockwise)

Preceding gene: 103487263

Following gene: 103487270

Centisome position: 56.15

GC content: 62.92

Gene sequence:

>720_bases
ATGAGCAACATCACACGCAGGCAAGCCATCGGCACAGCGGCATTGTCAGCGACCGGCATTGCGCTGGCAGGAAATGCAGG
TGCAGCCGCCGCGCAAGGTGCTGGCAGCGGTGCGGCCGCGTTCGCAGGCAAGCACACACCCAAACAGCTGCGCTTCAATC
CGGCCAAGCTAACCGGGCTGTCCGAACGGCTGATCACCTCGCACTGGGAGAACAATTACCAGGGCTCGGTGCGCGGGCTC
AACACCATCGAAACCCGGCTTGCCGCAGCCATGGCCGACCCGGACTTCCCAGCAGTTGCCTATGCTGGGCTGAAGCGTGA
GGAGTTGCACCGGACCGGATCGATTGTGCTGCACGAATATTACTTCGATGCGCTGGGCGGCAGCGGCAATCCGGGCGGGT
CGATCTACGAAGCGCTGGACGGATGGTTCGGCAGTTTTGCCGCGTGGGAGGCGGAGTTTCGCCGCACGGCGATGTCGCTG
GCAGGCGGGTCAGGCTGGTGCATCCTCAGCTACAACCGTCACACCGCCTCGCTGCACAATTACTGGGCGTCGGATCACAT
GCACGGCGCGATCAATGCCGCCCCGCTGATCGCGCTCGATATGTATGAGCACAGCTATCACATGGACTACGGGGCCGCGG
CAGCGAAATATGTCGATGCCTTCATGGCCAATCTGGATTGGGAGGTGGTGGACGCGCGGTATCGGGCCGCGCTGTCATAG

Upstream 100 bases:

>100_bases
TCTTGCCTTTTTCGTCGGTGCTTTCGCGCGGTTTGGGGCGCAATTGGCTGGCGATTACGATACCATCAGGAACACTGTGC
TCAAAGCAATGGAGGACAGC

Downstream 100 bases:

>100_bases
CTTCACGCCGAACTGGCCGAGCGCCCACACCATCACCAGATAGAGCGCCACGGTCAGCGCGCAGCCGATGGCCAGCGCAC
TCCAGAACCCGATGCCACGA

Product: manganese and iron superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSNITRRQAIGTAALSATGIALAGNAGAAAAQGAGSGAAAFAGKHTPKQLRFNPAKLTGLSERLITSHWENNYQGSVRGL
NTIETRLAAAMADPDFPAVAYAGLKREELHRTGSIVLHEYYFDALGGSGNPGGSIYEALDGWFGSFAAWEAEFRRTAMSL
AGGSGWCILSYNRHTASLHNYWASDHMHGAINAAPLIALDMYEHSYHMDYGAAAAKYVDAFMANLDWEVVDARYRAALS

Sequences:

>Translated_239_residues
MSNITRRQAIGTAALSATGIALAGNAGAAAAQGAGSGAAAFAGKHTPKQLRFNPAKLTGLSERLITSHWENNYQGSVRGL
NTIETRLAAAMADPDFPAVAYAGLKREELHRTGSIVLHEYYFDALGGSGNPGGSIYEALDGWFGSFAAWEAEFRRTAMSL
AGGSGWCILSYNRHTASLHNYWASDHMHGAINAAPLIALDMYEHSYHMDYGAAAAKYVDAFMANLDWEVVDARYRAALS
>Mature_238_residues
SNITRRQAIGTAALSATGIALAGNAGAAAAQGAGSGAAAFAGKHTPKQLRFNPAKLTGLSERLITSHWENNYQGSVRGLN
TIETRLAAAMADPDFPAVAYAGLKREELHRTGSIVLHEYYFDALGGSGNPGGSIYEALDGWFGSFAAWEAEFRRTAMSLA
GGSGWCILSYNRHTASLHNYWASDHMHGAINAAPLIALDMYEHSYHMDYGAAAAKYVDAFMANLDWEVVDARYRAALS

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=199, Percent_Identity=25.6281407035176, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI67782305, Length=199, Percent_Identity=25.6281407035176, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787946, Length=182, Percent_Identity=27.4725274725275, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 2020 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 900 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 25535; Mature: 25403

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNITRRQAIGTAALSATGIALAGNAGAAAAQGAGSGAAAFAGKHTPKQLRFNPAKLTGL
CCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHHHCCH
SERLITSHWENNYQGSVRGLNTIETRLAAAMADPDFPAVAYAGLKREELHRTGSIVLHEY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCEEEEEH
YFDALGGSGNPGGSIYEALDGWFGSFAAWEAEFRRTAMSLAGGSGWCILSYNRHTASLHN
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
YWASDHMHGAINAAPLIALDMYEHSYHMDYGAAAAKYVDAFMANLDWEVVDARYRAALS
HHHCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCC
>Mature Secondary Structure 
SNITRRQAIGTAALSATGIALAGNAGAAAAQGAGSGAAAFAGKHTPKQLRFNPAKLTGL
CCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHHHCCH
SERLITSHWENNYQGSVRGLNTIETRLAAAMADPDFPAVAYAGLKREELHRTGSIVLHEY
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCEEEEEH
YFDALGGSGNPGGSIYEALDGWFGSFAAWEAEFRRTAMSLAGGSGWCILSYNRHTASLHN
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
YWASDHMHGAINAAPLIALDMYEHSYHMDYGAAAAKYVDAFMANLDWEVVDARYRAALS
HHHCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471500; 2180932 [H]