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The map label for this gene is 103487183

Identifier: 103487183

GI number: 103487183

Start: 1788271

End: 1789713

Strand: Direct

Name: 103487183

Synonym: Sala_1698

Alternate gene names: NA

Gene position: 1788271-1789713 (Clockwise)

Preceding gene: 103487182

Following gene: 103487184

Centisome position: 53.46

GC content: 66.04

Gene sequence:

>1443_bases
ATGGCAAGCCAGGTCGAAACACTGATCCGCAGCGCCGTCGTCAAAACCATCGGCAAGGTCGCCGATTTCAATCGCCGCCG
CCTCCCCCGCCCCACCGACGCCCACCCCTTCCTCTCCGGCATCCACAGGCCGATGACCGAAGAATTGACGATCGAGGCGC
TGCGCGTCGATGGCGAAATCCCGGCCGCGCTACGCGGCCGTTACCTGCGCAACGGCCCGAATCCGGCAATGCCGCCCGAT
CCCGCCAGCTATCACTGGTTCATCGGCGCCGGCATGGTCCACGGCATCCGCATCGAAGGCGGCCAGGCCGTCTGGTATCG
CAACCGCTGGGTGCGTGGCAGCGAGGCGTGCGCTGCGCTTGGCGAGGAGCTGCCGCCCGGCCCGCGCGAAGAGCGCAACG
ACGCGCCGAACACCAATGTCGTGGGTCTCGCCGGGCGGACGTTCGCAATCGTCGAGGCGGGCGGCACGCCGGTCGAGCTC
GATCATGAGCTCGGCACCATCGCGCATAACCCTTTCGACGGCACCCTCGCGGGTGCGTTCACCGCGCACCCACACGCCGA
CCCCTTCACCGGGGAAACGCACGCGATCACCTATCGCAGCGACGAACCGAACAAGGTCTGGCACGTCGTGCTCGACGAAC
AGGCGCATGTCGTGCGCGAAGAACCGATTGCGGTCAGCGACGGCCCCTCGATCCACGACTGCGCGCTGACCGAAAATTAC
GTGCTCGTCTTCGACCTGCCCGTTACTTTCTCGATGAAACGGCTGCTCGCAGGTTATCGTTTTCCCTATATGTGGAACGA
AAATCACCCGGCGCGCGTCGGCCTGCTCCCGCGCGAGGGCCGTGGCGACGACATCGTCTGGGTGCCGGTCGATCCCTGCT
ATGTCTTTCACCCCGCCAACGCCTTTGAAACCGCGGACGGCCGGGTGATCGTCGATGTCGTCGCGCACGAAACGATGTTC
GCCACGTCGAAGCGCGGCCCCGACAGCGAAAAGTCGCGCATGGAACGCTGGACGATCGATCCCGTCGCGCGCACGACGAC
ACGCACCGTGATCCACGACCATGCGCAGGAGTTTCCGCGCTATGACGAGCGGCTGACGACGCGGCCCTATCGCTATGTCT
ACAGCATCGCGATCCCCGACGGCCGTTCAGCCGAATGGGCGCTCGCCGATACCCGGCTGTTCCGCCACGATCTCGAAACG
GGCACGACCGCCATCCACGACTTCGGCTCCGGCCGCCACCCCGGCGAGTTTGTATTCGTTCCGCGCAAGGCGGCGGGCGC
CGAGGATGACGGCTGGCTGATCGGCCTCGTCGTCGACATGAACGACGAGACCACCGACCTCGTCATCCTCAACGCCGACG
ATTTCACCGGGCCGCCGCAAGCCGTCGTCCATCTGCCGCACCGCGTTCCGCCGGGGTTTCATGGCAATTGGGTCGCGGAC
TGA

Upstream 100 bases:

>100_bases
GTCGCCCTGCGACGTCCGCACCCCGGCGGTCTGCTGCTGTTGCTGGCCACCGCCACCACCGCAACCGACCTCATCGTCAA
CTGACTGGAAGGAACAGACC

Downstream 100 bases:

>100_bases
GGGGGGCTCCGCTCCCGGATGCGCGCGCTGATAGGTTGCCGATCGCACCGGCCCGCCCGCGGAAGAGATCGGCGGCGCGA
TGGCGCCGAGCGCCGACGCG

Product: carotenoid oxygenase

Products: NA

Alternate protein names: ACO; 8'-apo-beta-carotenal 15,15'-oxygenase; Diox1 [H]

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MASQVETLIRSAVVKTIGKVADFNRRRLPRPTDAHPFLSGIHRPMTEELTIEALRVDGEIPAALRGRYLRNGPNPAMPPD
PASYHWFIGAGMVHGIRIEGGQAVWYRNRWVRGSEACAALGEELPPGPREERNDAPNTNVVGLAGRTFAIVEAGGTPVEL
DHELGTIAHNPFDGTLAGAFTAHPHADPFTGETHAITYRSDEPNKVWHVVLDEQAHVVREEPIAVSDGPSIHDCALTENY
VLVFDLPVTFSMKRLLAGYRFPYMWNENHPARVGLLPREGRGDDIVWVPVDPCYVFHPANAFETADGRVIVDVVAHETMF
ATSKRGPDSEKSRMERWTIDPVARTTTRTVIHDHAQEFPRYDERLTTRPYRYVYSIAIPDGRSAEWALADTRLFRHDLET
GTTAIHDFGSGRHPGEFVFVPRKAAGAEDDGWLIGLVVDMNDETTDLVILNADDFTGPPQAVVHLPHRVPPGFHGNWVAD

Sequences:

>Translated_480_residues
MASQVETLIRSAVVKTIGKVADFNRRRLPRPTDAHPFLSGIHRPMTEELTIEALRVDGEIPAALRGRYLRNGPNPAMPPD
PASYHWFIGAGMVHGIRIEGGQAVWYRNRWVRGSEACAALGEELPPGPREERNDAPNTNVVGLAGRTFAIVEAGGTPVEL
DHELGTIAHNPFDGTLAGAFTAHPHADPFTGETHAITYRSDEPNKVWHVVLDEQAHVVREEPIAVSDGPSIHDCALTENY
VLVFDLPVTFSMKRLLAGYRFPYMWNENHPARVGLLPREGRGDDIVWVPVDPCYVFHPANAFETADGRVIVDVVAHETMF
ATSKRGPDSEKSRMERWTIDPVARTTTRTVIHDHAQEFPRYDERLTTRPYRYVYSIAIPDGRSAEWALADTRLFRHDLET
GTTAIHDFGSGRHPGEFVFVPRKAAGAEDDGWLIGLVVDMNDETTDLVILNADDFTGPPQAVVHLPHRVPPGFHGNWVAD
>Mature_479_residues
ASQVETLIRSAVVKTIGKVADFNRRRLPRPTDAHPFLSGIHRPMTEELTIEALRVDGEIPAALRGRYLRNGPNPAMPPDP
ASYHWFIGAGMVHGIRIEGGQAVWYRNRWVRGSEACAALGEELPPGPREERNDAPNTNVVGLAGRTFAIVEAGGTPVELD
HELGTIAHNPFDGTLAGAFTAHPHADPFTGETHAITYRSDEPNKVWHVVLDEQAHVVREEPIAVSDGPSIHDCALTENYV
LVFDLPVTFSMKRLLAGYRFPYMWNENHPARVGLLPREGRGDDIVWVPVDPCYVFHPANAFETADGRVIVDVVAHETMFA
TSKRGPDSEKSRMERWTIDPVARTTTRTVIHDHAQEFPRYDERLTTRPYRYVYSIAIPDGRSAEWALADTRLFRHDLETG
TTAIHDFGSGRHPGEFVFVPRKAAGAEDDGWLIGLVVDMNDETTDLVILNADDFTGPPQAVVHLPHRVPPGFHGNWVAD

Specific function: Cleaves a number of carotenals and carotenols in the all-trans configuration at the 15-15' double bond producing retinal or retinol, respectively. Also shows activity toward lycopenals and the corresponding alcohols. Does not cleave beta- carotene or lyco

COG id: COG3670

COG function: function code Q; Lignostilbene-alpha,beta-dioxygenase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004294 [H]

Pfam domain/function: PF03055 RPE65 [H]

EC number: =1.14.99.41 [H]

Molecular weight: Translated: 53352; Mature: 53221

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQVETLIRSAVVKTIGKVADFNRRRLPRPTDAHPFLSGIHRPMTEELTIEALRVDGEI
CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHCCCCCHHEEEEEEEECCCC
PAALRGRYLRNGPNPAMPPDPASYHWFIGAGMVHGIRIEGGQAVWYRNRWVRGSEACAAL
CHHHHCHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEEEECCCCCCHHHHHHH
GEELPPGPREERNDAPNTNVVGLAGRTFAIVEAGGTPVELDHELGTIAHNPFDGTLAGAF
HHCCCCCCCHHCCCCCCCCEEEECCCEEEEEECCCCCEEECCCCCCEECCCCCCCEEEEE
TAHPHADPFTGETHAITYRSDEPNKVWHVVLDEQAHVVREEPIAVSDGPSIHDCALTENY
ECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHCCCEEECCCCCCEEEEECCCE
VLVFDLPVTFSMKRLLAGYRFPYMWNENHPARVGLLPREGRGDDIVWVPVDPCYVFHPAN
EEEEECCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCEEEEECCC
AFETADGRVIVDVVAHETMFATSKRGPDSEKSRMERWTIDPVARTTTRTVIHDHAQEFPR
CCCCCCCCEEEEEECCCHHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
YDERLTTRPYRYVYSIAIPDGRSAEWALADTRLFRHDLETGTTAIHDFGSGRHPGEFVFV
HHHHHCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCEEHHCCCCCCCCCEEEE
PRKAAGAEDDGWLIGLVVDMNDETTDLVILNADDFTGPPQAVVHLPHRVPPGFHGNWVAD
ECHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASQVETLIRSAVVKTIGKVADFNRRRLPRPTDAHPFLSGIHRPMTEELTIEALRVDGEI
CHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHCCCCCHHEEEEEEEECCCC
PAALRGRYLRNGPNPAMPPDPASYHWFIGAGMVHGIRIEGGQAVWYRNRWVRGSEACAAL
CHHHHCHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEEEECCCCCCHHHHHHH
GEELPPGPREERNDAPNTNVVGLAGRTFAIVEAGGTPVELDHELGTIAHNPFDGTLAGAF
HHCCCCCCCHHCCCCCCCCEEEECCCEEEEEECCCCCEEECCCCCCEECCCCCCCEEEEE
TAHPHADPFTGETHAITYRSDEPNKVWHVVLDEQAHVVREEPIAVSDGPSIHDCALTENY
ECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHCCCEEECCCCCCEEEEECCCE
VLVFDLPVTFSMKRLLAGYRFPYMWNENHPARVGLLPREGRGDDIVWVPVDPCYVFHPAN
EEEEECCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCEEEEECCC
AFETADGRVIVDVVAHETMFATSKRGPDSEKSRMERWTIDPVARTTTRTVIHDHAQEFPR
CCCCCCCCEEEEEECCCHHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
YDERLTTRPYRYVYSIAIPDGRSAEWALADTRLFRHDLETGTTAIHDFGSGRHPGEFVFV
HHHHHCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCEEHHCCCCCCCCCEEEE
PRKAAGAEDDGWLIGLVVDMNDETTDLVILNADDFTGPPQAVVHLPHRVPPGFHGNWVAD
ECHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCHHEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]