Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487182

Identifier: 103487182

GI number: 103487182

Start: 1787886

End: 1788254

Strand: Direct

Name: 103487182

Synonym: Sala_1697

Alternate gene names: NA

Gene position: 1787886-1788254 (Clockwise)

Preceding gene: 103487179

Following gene: 103487183

Centisome position: 53.45

GC content: 64.77

Gene sequence:

>369_bases
ATGATCGCGTGGTCGGCCATCGCCGCTGGTTTAGCCATTGTCGTCGCGCTTGCCCACTCGGCGATCAGCGAGCGTGTGAT
CCTGCAACCATTGTTCCGACAACCGGCGCAAGGCCTCCTCGCTACGGAACCCGGCCGCGGCATCGTTCGCGCGGTATTCC
ACATACCGTCGGTCGCGTGGGCGGCGCTCGGCCTGGGCGTATGGCTCAACCGGCTTCAAAACGGTCCCGATCTCGTCGCG
GTGATCGCAATGATCGTGTTCGCATCCTCGGCGATCAGCAATCTCGTCGCCCTGCGACGTCCGCACCCCGGCGGTCTGCT
GCTGTTGCTGGCCACCGCCACCACCGCAACCGACCTCATCGTCAACTGA

Upstream 100 bases:

>100_bases
TTGGCGCCGCTCTCTTTTATGTTGACACTGTTATCTTTGCTGTGCATCATGTTTTCGCTGTAAACATTTCGAGTCGTATA
GACAAGGCTGGAGTTCCCGA

Downstream 100 bases:

>100_bases
CTGGAAGGAACAGACCATGGCAAGCCAGGTCGAAACACTGATCCGCAGCGCCGTCGTCAAAACCATCGGCAAGGTCGCCG
ATTTCAATCGCCGCCGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MIAWSAIAAGLAIVVALAHSAISERVILQPLFRQPAQGLLATEPGRGIVRAVFHIPSVAWAALGLGVWLNRLQNGPDLVA
VIAMIVFASSAISNLVALRRPHPGGLLLLLATATTATDLIVN

Sequences:

>Translated_122_residues
MIAWSAIAAGLAIVVALAHSAISERVILQPLFRQPAQGLLATEPGRGIVRAVFHIPSVAWAALGLGVWLNRLQNGPDLVA
VIAMIVFASSAISNLVALRRPHPGGLLLLLATATTATDLIVN
>Mature_122_residues
MIAWSAIAAGLAIVVALAHSAISERVILQPLFRQPAQGLLATEPGRGIVRAVFHIPSVAWAALGLGVWLNRLQNGPDLVA
VIAMIVFASSAISNLVALRRPHPGGLLLLLATATTATDLIVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12699; Mature: 12699

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAWSAIAAGLAIVVALAHSAISERVILQPLFRQPAQGLLATEPGRGIVRAVFHIPSVAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHH
AALGLGVWLNRLQNGPDLVAVIAMIVFASSAISNLVALRRPHPGGLLLLLATATTATDLI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
VN
CC
>Mature Secondary Structure
MIAWSAIAAGLAIVVALAHSAISERVILQPLFRQPAQGLLATEPGRGIVRAVFHIPSVAW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHH
AALGLGVWLNRLQNGPDLVAVIAMIVFASSAISNLVALRRPHPGGLLLLLATATTATDLI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
VN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA