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The map label for this gene is ompW [C]

Identifier: 103487162

GI number: 103487162

Start: 1765313

End: 1765984

Strand: Direct

Name: ompW [C]

Synonym: Sala_1677

Alternate gene names: 103487162

Gene position: 1765313-1765984 (Clockwise)

Preceding gene: 103487152

Following gene: 103487173

Centisome position: 52.77

GC content: 64.88

Gene sequence:

>672_bases
ATGAAATGCCGATATTTCTCCCTCGCCGCCCTCGCGGTCGCGCTGGCCGTCCCGGGGCAGGCCGCTGCAAAGAGCGGCGA
CATCCGGTTCAAACTGCTCGCAACCTATGTGGCGCCCGATGGCAAGATTGACGATGTGAAGCTCGACCTGATCGGCCTGC
CCGCAGGCACGCAGACCAAGGCCGACGACAATGTCGTCCCGACCGTCGCGATCGAATATTTCGTCGCCGACAATATCTCG
CTCGAAACTATCGCGGGCGTGACTCAGCATGACGTCGTCGGCCGGGGCGGACTCGCCGGGGCGGGGCTGGTATCCGATGC
GAATATCGTCCCGGCAACGCTGACGCTGAAATATCATTTCGGCAAGGAGGGCGGTATTCAGCCCTATGTCGGCGCCGGGC
CCAGCTATTTCATCTTCATCGACGAGAAGCCCGGCGCGACCGCGGTGGCGCTCGGCGCGACGCGGCAGAAGATGAACGAT
ACGCTCGGCTTTGCGCTTCAGGCGGGAATCGACGTGCCGGTCAACGACAGGGGGCTGGCGGTCACGTTCGACGCGAAGCG
TTATTTCCTGCGCCCCACCGCGCGCTGGTTCGCCGGGCCGACCGAGGTGCTGCGCACCCGGCACAAGCTCGATCCCTGGG
TCGTCAGCGCAGGGGCGGCCTTCCGCTTCTGA

Upstream 100 bases:

>100_bases
GAAACATTGACCGGGATCAACGAATTGCTTGCGCTCCATCAATGCGGCGGGCGGACTCCCGGCGCAGGGACCGCCTTGTC
AACAACAGGAGCCAAGTTCC

Downstream 100 bases:

>100_bases
ACGGCGGTTTTATCCCGCCATATCCTCCATCGCCGCGCGATCGTGGATGACGATCTCGCGGCGCGAGGGGAGGTCGAGCA
CGCCGTCGGCGCGCATTTTC

Product: OmpW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKCRYFSLAALAVALAVPGQAAAKSGDIRFKLLATYVAPDGKIDDVKLDLIGLPAGTQTKADDNVVPTVAIEYFVADNIS
LETIAGVTQHDVVGRGGLAGAGLVSDANIVPATLTLKYHFGKEGGIQPYVGAGPSYFIFIDEKPGATAVALGATRQKMND
TLGFALQAGIDVPVNDRGLAVTFDAKRYFLRPTARWFAGPTEVLRTRHKLDPWVVSAGAAFRF

Sequences:

>Translated_223_residues
MKCRYFSLAALAVALAVPGQAAAKSGDIRFKLLATYVAPDGKIDDVKLDLIGLPAGTQTKADDNVVPTVAIEYFVADNIS
LETIAGVTQHDVVGRGGLAGAGLVSDANIVPATLTLKYHFGKEGGIQPYVGAGPSYFIFIDEKPGATAVALGATRQKMND
TLGFALQAGIDVPVNDRGLAVTFDAKRYFLRPTARWFAGPTEVLRTRHKLDPWVVSAGAAFRF
>Mature_223_residues
MKCRYFSLAALAVALAVPGQAAAKSGDIRFKLLATYVAPDGKIDDVKLDLIGLPAGTQTKADDNVVPTVAIEYFVADNIS
LETIAGVTQHDVVGRGGLAGAGLVSDANIVPATLTLKYHFGKEGGIQPYVGAGPSYFIFIDEKPGATAVALGATRQKMND
TLGFALQAGIDVPVNDRGLAVTFDAKRYFLRPTARWFAGPTEVLRTRHKLDPWVVSAGAAFRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 23610; Mature: 23610

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCRYFSLAALAVALAVPGQAAAKSGDIRFKLLATYVAPDGKIDDVKLDLIGLPAGTQTK
CCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCC
ADDNVVPTVAIEYFVADNISLETIAGVTQHDVVGRGGLAGAGLVSDANIVPATLTLKYHF
CCCCCCCEEEEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCEECCCCEEEEEEEEEEEE
GKEGGIQPYVGAGPSYFIFIDEKPGATAVALGATRQKMNDTLGFALQAGIDVPVNDRGLA
CCCCCCCCEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCEEEECCCCCCCCCCCEE
VTFDAKRYFLRPTARWFAGPTEVLRTRHKLDPWVVSAGAAFRF
EEECCCEEEECCCHHHHCCHHHHHHHHHCCCCEEEECCCEECC
>Mature Secondary Structure
MKCRYFSLAALAVALAVPGQAAAKSGDIRFKLLATYVAPDGKIDDVKLDLIGLPAGTQTK
CCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCC
ADDNVVPTVAIEYFVADNISLETIAGVTQHDVVGRGGLAGAGLVSDANIVPATLTLKYHF
CCCCCCCEEEEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCEECCCCEEEEEEEEEEEE
GKEGGIQPYVGAGPSYFIFIDEKPGATAVALGATRQKMNDTLGFALQAGIDVPVNDRGLA
CCCCCCCCEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHCEEEECCCCCCCCCCCEE
VTFDAKRYFLRPTARWFAGPTEVLRTRHKLDPWVVSAGAAFRF
EEECCCEEEECCCHHHHCCHHHHHHHHHCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]