Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is pheA [H]
Identifier: 103486115
GI number: 103486115
Start: 633209
End: 634102
Strand: Direct
Name: pheA [H]
Synonym: Sala_0622
Alternate gene names: 103486115
Gene position: 633209-634102 (Clockwise)
Preceding gene: 103486112
Following gene: 103486121
Centisome position: 18.93
GC content: 66.0
Gene sequence:
>894_bases ATGGGCAGTTATTCGGCTTCGGCGCAGCATCTGGTCGACAAAATGCGGGCGCTGGCCCTGGCCGAACCCGCGCGCGGGCT GGCGTTCCAGGGCGCGCCTGGCGCGAACAGCGACCTCGCCGCGCGCGAATATGACCCGAACTCGCTGCCGCTGCCCTGCT ATGCCTTCGAGGATGCGATCGATGCGGTGCGCGAAGGCCTGGTCGACCGCGCGATCATTCCGATCGAGAACAGCCTGCAT GGCCGGGTCGCCGACATTCATTTCCTGCTCCCCGAATCCGGCCTGTCGATTGTCGGCGAACATTTCCTGCCGATCCGCTA TGGGTTGATGAGCCGCAATCTGGGACCGGTGACGCGCGCGATGAGCCACGAACAGGCGCTCGGCCAGTGCCGCAAATGGT TGCGCGCCAATAATATCGCGCCCGTCGCGCACAGCGACACCGCGGGCGCCGCCGCCTGGGTTGCCGACAGCGACGAGGTC GGGCTCGCCGCACTGGCGCCGCCGCACGCCGCCGACCTCTATGGCCTGACGCTGCACGGCACGGGAATGGAGGACGCCGA TCATAATATGACGCGCTTCGTCGTGCTCGCGCGCGAGCCCTTGCGCGATCTTTCGGCAGTCGAAGGGCCGGTGATGACGA CCTTCATGTTCGAGGTGAAGAATATCCCCGCTGCGCTCTACAAGGCGCTCGGCGGCTTTGCGACCAACGGCGTCAACATG ACCAAGCTCGAAAGCTATCAGACGGGCGGCAGCTTTGCCGCGACCAAATTTTACGCCGACATCGTCGGCGCGCCGGGCGA CGAACGTGTCGACCGCGCGCTGGAGGAGCTGGATTTCCAGACCAAGTCGCTGCGCCTGCTCGGCACTTATCCGCAGGCGC GCCCGCGTCCCTGA
Upstream 100 bases:
>100_bases GCGCAAGGGGATGAAATCGGCGGACGGGTCGCCGCCGCGGCTGGTTGCGCGCTGGCGGCGGTGTCGCTATGCGCCGCGGT TCCAGCGTGGGAAGGCAGTC
Downstream 100 bases:
>100_bases GCCTTTCAGTTGCCGCGGCGGCGCAGCATCCGCGCGGTCATCGACGTCTGGACGACAAACAGCGTGACGAGGATGCTCGC GACGACGAGCGCGAACAGGT
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGSYSASAQHLVDKMRALALAEPARGLAFQGAPGANSDLAAREYDPNSLPLPCYAFEDAIDAVREGLVDRAIIPIENSLH GRVADIHFLLPESGLSIVGEHFLPIRYGLMSRNLGPVTRAMSHEQALGQCRKWLRANNIAPVAHSDTAGAAAWVADSDEV GLAALAPPHAADLYGLTLHGTGMEDADHNMTRFVVLAREPLRDLSAVEGPVMTTFMFEVKNIPAALYKALGGFATNGVNM TKLESYQTGGSFAATKFYADIVGAPGDERVDRALEELDFQTKSLRLLGTYPQARPRP
Sequences:
>Translated_297_residues MGSYSASAQHLVDKMRALALAEPARGLAFQGAPGANSDLAAREYDPNSLPLPCYAFEDAIDAVREGLVDRAIIPIENSLH GRVADIHFLLPESGLSIVGEHFLPIRYGLMSRNLGPVTRAMSHEQALGQCRKWLRANNIAPVAHSDTAGAAAWVADSDEV GLAALAPPHAADLYGLTLHGTGMEDADHNMTRFVVLAREPLRDLSAVEGPVMTTFMFEVKNIPAALYKALGGFATNGVNM TKLESYQTGGSFAATKFYADIVGAPGDERVDRALEELDFQTKSLRLLGTYPQARPRP >Mature_296_residues GSYSASAQHLVDKMRALALAEPARGLAFQGAPGANSDLAAREYDPNSLPLPCYAFEDAIDAVREGLVDRAIIPIENSLHG RVADIHFLLPESGLSIVGEHFLPIRYGLMSRNLGPVTRAMSHEQALGQCRKWLRANNIAPVAHSDTAGAAAWVADSDEVG LAALAPPHAADLYGLTLHGTGMEDADHNMTRFVVLAREPLRDLSAVEGPVMTTFMFEVKNIPAALYKALGGFATNGVNMT KLESYQTGGSFAATKFYADIVGAPGDERVDRALEELDFQTKSLRLLGTYPQARPRP
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=279, Percent_Identity=32.6164874551971, Blast_Score=124, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 31927; Mature: 31795
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSYSASAQHLVDKMRALALAEPARGLAFQGAPGANSDLAAREYDPNSLPLPCYAFEDAI CCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DAVREGLVDRAIIPIENSLHGRVADIHFLLPESGLSIVGEHFLPIRYGLMSRNLGPVTRA HHHHHHHHHCEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH MSHEQALGQCRKWLRANNIAPVAHSDTAGAAAWVADSDEVGLAALAPPHAADLYGLTLHG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEC TGMEDADHNMTRFVVLAREPLRDLSAVEGPVMTTFMFEVKNIPAALYKALGGFATNGVNM CCCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHCCCCCH TKLESYQTGGSFAATKFYADIVGAPGDERVDRALEELDFQTKSLRLLGTYPQARPRP HEEHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCC >Mature Secondary Structure GSYSASAQHLVDKMRALALAEPARGLAFQGAPGANSDLAAREYDPNSLPLPCYAFEDAI CCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DAVREGLVDRAIIPIENSLHGRVADIHFLLPESGLSIVGEHFLPIRYGLMSRNLGPVTRA HHHHHHHHHCEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH MSHEQALGQCRKWLRANNIAPVAHSDTAGAAAWVADSDEVGLAALAPPHAADLYGLTLHG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCEEEEEEEC TGMEDADHNMTRFVVLAREPLRDLSAVEGPVMTTFMFEVKNIPAALYKALGGFATNGVNM CCCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHCCCCCH TKLESYQTGGSFAATKFYADIVGAPGDERVDRALEELDFQTKSLRLLGTYPQARPRP HEEHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]