Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486121
Identifier: 103486121
GI number: 103486121
Start: 639242
End: 639535
Strand: Direct
Name: 103486121
Synonym: Sala_0628
Alternate gene names: NA
Gene position: 639242-639535 (Clockwise)
Preceding gene: 103486115
Following gene: 103486122
Centisome position: 19.11
GC content: 68.03
Gene sequence:
>294_bases ATGATGGACGATTGGCGAGTGGATGACCTGGCGCTGTGCATCAGCCGACACGAGCGCTATCCGCCGGAGGTCCGGCCCGG AGCGGTCCTTACGGTTCGCGCGGTGCTGGTCGATATGCCCGACCTTGCCGGTGGGCAGGCGGGAACCGCGCTGAACTTCC GCGATGTGCCCGATCTTGGCCCGCGTGCCGCCTATTGCGCGCGCCGGTTTCGCAAGATCACCCCCGGCGCGCCCGACAGC TTCGACGCCGAAGTGATCGACCTTATGGCGGACGCGACGCGGGTCGGTCGCTGA
Upstream 100 bases:
>100_bases GCGGCGCACCTTGGCCAGCGGCCAAATGGCGTCGCGCGGCCGGTCATTCTGTGATAATTCTGGCCCAACCACCCTGGTGA ATGCTGCGGGAGGGTCGATA
Downstream 100 bases:
>100_bases TCGCCGATTTACATCAATCCGCCGCTTTGATCGATTGTTTCGATAAGTGTGCCCGGAAATTTGGGGTTGAGTGCTGCGGC CGCTCGGCATAGCTGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MMDDWRVDDLALCISRHERYPPEVRPGAVLTVRAVLVDMPDLAGGQAGTALNFRDVPDLGPRAAYCARRFRKITPGAPDS FDAEVIDLMADATRVGR
Sequences:
>Translated_97_residues MMDDWRVDDLALCISRHERYPPEVRPGAVLTVRAVLVDMPDLAGGQAGTALNFRDVPDLGPRAAYCARRFRKITPGAPDS FDAEVIDLMADATRVGR >Mature_97_residues MMDDWRVDDLALCISRHERYPPEVRPGAVLTVRAVLVDMPDLAGGQAGTALNFRDVPDLGPRAAYCARRFRKITPGAPDS FDAEVIDLMADATRVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10669; Mature: 10669
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDDWRVDDLALCISRHERYPPEVRPGAVLTVRAVLVDMPDLAGGQAGTALNFRDVPDLG CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PRAAYCARRFRKITPGAPDSFDAEVIDLMADATRVGR CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MMDDWRVDDLALCISRHERYPPEVRPGAVLTVRAVLVDMPDLAGGQAGTALNFRDVPDLG CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PRAAYCARRFRKITPGAPDSFDAEVIDLMADATRVGR CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA