The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486104

Identifier: 103486104

GI number: 103486104

Start: 621473

End: 622231

Strand: Direct

Name: 103486104

Synonym: Sala_0611

Alternate gene names: NA

Gene position: 621473-622231 (Clockwise)

Preceding gene: 103486103

Following gene: 103486105

Centisome position: 18.58

GC content: 69.17

Gene sequence:

>759_bases
ATGCGGACCCCGCGCAATGATCAACTGAGCCAAACCGACCGCGCAAAGGGGCGCGGCCACCATGTGCCCGAGCGGCGCTG
CGTCGTCACCGGTGAGGTTTCGCCGGTAGAGCGGCTCGTGCGTCTGGCGCTCGGTCCCGACGGCGGCATTGCGCCGGATG
TTCACGGCAAGGCGCCTGGCCGCGGCGCGTGGATCGGCGTCGACCGCGTGACCCTCGAAGCTGCGCAGGCCAAGGGCAAG
CTCAAGGCGGGCCTCGCGCGCGCGCTGCACGAAGGCGGCTTCACGATCCCCGACGATCTGGGCGCGCGGATCGAGGCGCA
GCTGGCCCGCGCGACGCTCGACCGGCTGGGACTCGAATCGCGAGCGGGAATGCTCATCAGCGGCAACGACAAGATCGAAC
AGGCGGCGCGGCGCGGGCAGGTTCGCCTGCTCCTCCACGCGAGCGATGCGGGTGACGACGGTCGCAAGAAACTGGCGCAG
GCGTGGCGCGTCGGCGAGGATGACGAAGGATCGGGCCGCGAAGGACTGGTCTTGCCGGTAGACCGCGGCACCCTATCTAT
GGCATTGGGGCGCGAGAATGCGGTGCATCTGGCGATTGTCGACGCCCGCGCCGCCGACCGGGTGCTGGCGCACTTGAGCC
GCTGGCAGTTTTTCACCGGATGGAGTAGGGACGCGGCCAATCGCGTTTCGGATACGGATTCCCGCGAGCCGGGAACAGGG
GATACGTCCGCGGCTTCCGCCGTTTCGGGCGCGTTTTGA

Upstream 100 bases:

>100_bases
GAGATCATCATGGCGGCGCGTGCGCACTGGTTCGACGATGAGGAGTCGAGCGAGCCGGCAACCGCGCCCGCGGCGGAGCC
GCAAAACGGGGAGGCCGCCG

Downstream 100 bases:

>100_bases
AGGAATGATGGTTTTCGATGAGTGACGAACAGGACAAGCCGACCCTTAGCCGCAAGCCGCTGGGCCTGAAGCGGACGGTC
GAGGCCGGACAGGTGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRTPRNDQLSQTDRAKGRGHHVPERRCVVTGEVSPVERLVRLALGPDGGIAPDVHGKAPGRGAWIGVDRVTLEAAQAKGK
LKAGLARALHEGGFTIPDDLGARIEAQLARATLDRLGLESRAGMLISGNDKIEQAARRGQVRLLLHASDAGDDGRKKLAQ
AWRVGEDDEGSGREGLVLPVDRGTLSMALGRENAVHLAIVDARAADRVLAHLSRWQFFTGWSRDAANRVSDTDSREPGTG
DTSAASAVSGAF

Sequences:

>Translated_252_residues
MRTPRNDQLSQTDRAKGRGHHVPERRCVVTGEVSPVERLVRLALGPDGGIAPDVHGKAPGRGAWIGVDRVTLEAAQAKGK
LKAGLARALHEGGFTIPDDLGARIEAQLARATLDRLGLESRAGMLISGNDKIEQAARRGQVRLLLHASDAGDDGRKKLAQ
AWRVGEDDEGSGREGLVLPVDRGTLSMALGRENAVHLAIVDARAADRVLAHLSRWQFFTGWSRDAANRVSDTDSREPGTG
DTSAASAVSGAF
>Mature_252_residues
MRTPRNDQLSQTDRAKGRGHHVPERRCVVTGEVSPVERLVRLALGPDGGIAPDVHGKAPGRGAWIGVDRVTLEAAQAKGK
LKAGLARALHEGGFTIPDDLGARIEAQLARATLDRLGLESRAGMLISGNDKIEQAARRGQVRLLLHASDAGDDGRKKLAQ
AWRVGEDDEGSGREGLVLPVDRGTLSMALGRENAVHLAIVDARAADRVLAHLSRWQFFTGWSRDAANRVSDTDSREPGTG
DTSAASAVSGAF

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26807; Mature: 26807

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPRNDQLSQTDRAKGRGHHVPERRCVVTGEVSPVERLVRLALGPDGGIAPDVHGKAPG
CCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
RGAWIGVDRVTLEAAQAKGKLKAGLARALHEGGFTIPDDLGARIEAQLARATLDRLGLES
CCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCHH
RAGMLISGNDKIEQAARRGQVRLLLHASDAGDDGRKKLAQAWRVGEDDEGSGREGLVLPV
HCCEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE
DRGTLSMALGRENAVHLAIVDARAADRVLAHLSRWQFFTGWSRDAANRVSDTDSREPGTG
CCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC
DTSAASAVSGAF
CCHHHHHHCCCC
>Mature Secondary Structure
MRTPRNDQLSQTDRAKGRGHHVPERRCVVTGEVSPVERLVRLALGPDGGIAPDVHGKAPG
CCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
RGAWIGVDRVTLEAAQAKGKLKAGLARALHEGGFTIPDDLGARIEAQLARATLDRLGLES
CCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHCCHH
RAGMLISGNDKIEQAARRGQVRLLLHASDAGDDGRKKLAQAWRVGEDDEGSGREGLVLPV
HCCEEEECCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE
DRGTLSMALGRENAVHLAIVDARAADRVLAHLSRWQFFTGWSRDAANRVSDTDSREPGTG
CCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC
DTSAASAVSGAF
CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA