The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486098

Identifier: 103486098

GI number: 103486098

Start: 614727

End: 616436

Strand: Direct

Name: 103486098

Synonym: Sala_0605

Alternate gene names: NA

Gene position: 614727-616436 (Clockwise)

Preceding gene: 103486097

Following gene: 103486102

Centisome position: 18.38

GC content: 64.04

Gene sequence:

>1710_bases
ATGGACATGCAGGGCGGATTCGGCGCCGGGGATTCGACGGCGGTGCAACATGTGCGCCTGGCGGGCGGGGGTGTCGCGGC
CCCGGTGACACCGGGCACCGCCCATCATCGCGACGAGTTGCTGATCGGTGAGGTTGTCGATGTCTCGGGTTCGGCGTCGC
GCATCCTGCTCGACGCCGCGACAATCGCCAGACTGTCGTCGTCGGGCGATGCCACGGTCGCGATGGCGGGGCAGGTCGGC
GCGCAGGTCAAGGTCCGCGTCGGCAACATATGGCTCGTCGCCAGCATCCGCGACCAGCAGTTGCACGAACGCGGCGAGGG
ATTGATCCTCGCGACGATCGACTTGCTCGGCGAAGGCGAAGAGGAAAAGATTACCGGCCGCATCCACAATTTCCGTCGCG
GCGTGACGCGCTACCCCGTTCCGGGAAGCCCGGTCTTTGCGGCGACCAGCGCCGATCTCAAGCAAATCTACGCCGCCGAC
GAGCGCGCACATGTCGAGATCGGCACCGTCCACCCGACCAAGGATGTCCGCGGTTCGCTCTATGTCGACGCGATGCTGGG
CAAGCATTTCGCGCTGCTGGGATCGACGGGTACCGGCAAGTCGACCAGCGCCGCGCTGATCCTCCACAAGATCTGCGAAC
TCGCGCCGCAGGGCCATATCGTGATGATCGACCCGCACGGCGAATATTCGGCGGCGTTCAAGGGCACGGGCGCATTGTTC
GACGTCGACAATCTGGCGATGCCCTATTGGCTGATGAACTTCGAGGAACATTGCGAGGTGTTCGTCACGGCCGAGGGGCG
CGACCGCCAGGCCGACTGCGACGTGCTGGCGCGCTGCCTTCTCCAGGCGCGGATCAAGAACCGGCTGGCCGAAGGGATGA
CCAAGATCACGGTCGATTCGCCGATTCCCTATCTGCTCTCCGACCTGCTCAGCATCCTGACCAATGAAATGGGCAAGCTC
GACAAGGCGACCTCCAGCGCCCCCTTTATGCGGATCAAGGGCAAGATCGAGGAAATGCGCGCCGACCCGCGCTATAATTT
CATGTTTTCGGGCATGCTCGTCGCCGACACGATGGCGAACTTCCTCAGCAAGATTTTCCGCCTGCCCTCCGATGGGCGGC
CGATTTCGATCATCGACGTGTCGGGGGTGCCCAGCGACATTACCGGGGTTGTCGTCGCGGTGCTGTCGCGGCTGACCTTC
GACTATGCGATCTGGTCGCGCGGCGAACCGCAGCGCCCGATCCTGCTCGTGTGCGAGGAAGCGCACCGCTACATCCCCTC
GAAGGACATCGGCCAGGGACAGGCGGTGCGCAAGATTCTGGAACGTATCGCCAAGGAAGGGCGCAAATATGGCGTGTCGC
TGGGTCTGATCACCCAGCGTCCGTCGGACCTTGCCGAAGGCGTGCTGTCGCAGTGCGGCACCATCATCGCGATGCGCCTC
AACAACGAGCGAGACCAGCATTTCGTGAAAGCGGCGATGCCCGAAGGCGCGCGCGGCTTCATCGATTCGATCCCCGCGCT
GCGCAATCGCGAGTGCATCGTCTGCGGTGAGGGCGTGTCGATCCCGATCCGCGTCTACCTCGACACGCTCGAAGAGGAAA
AACGCCCGGCGTCGAGCGATCCACTCTTCTCGAAACTGTGGCGCGAAACGGGTGGCGAGGCCGAAATCGTCGAGCGCGTG
GTGAAACGCTGGCGCAGTCAGGGGCGGTAG

Upstream 100 bases:

>100_bases
CCGCCGTCGCTGAACCATATAGAGCACGCCGCTCTAAGCGCTTTGTTTACCCTCCTCTGCGATAGCTGAAAGCGGGACCA
CAAAGGCGGGGGCAGGATTT

Downstream 100 bases:

>100_bases
GCGCACCGTTTGCAGCTTTGTGTTCGCGGAAGGGCGGTTTTGGAGTGGGGAGCGGACGTAGCCCTCTCCCCTTCAGGGGA
GAGGATAGCGCAGCTTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MDMQGGFGAGDSTAVQHVRLAGGGVAAPVTPGTAHHRDELLIGEVVDVSGSASRILLDAATIARLSSSGDATVAMAGQVG
AQVKVRVGNIWLVASIRDQQLHERGEGLILATIDLLGEGEEEKITGRIHNFRRGVTRYPVPGSPVFAATSADLKQIYAAD
ERAHVEIGTVHPTKDVRGSLYVDAMLGKHFALLGSTGTGKSTSAALILHKICELAPQGHIVMIDPHGEYSAAFKGTGALF
DVDNLAMPYWLMNFEEHCEVFVTAEGRDRQADCDVLARCLLQARIKNRLAEGMTKITVDSPIPYLLSDLLSILTNEMGKL
DKATSSAPFMRIKGKIEEMRADPRYNFMFSGMLVADTMANFLSKIFRLPSDGRPISIIDVSGVPSDITGVVVAVLSRLTF
DYAIWSRGEPQRPILLVCEEAHRYIPSKDIGQGQAVRKILERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTIIAMRL
NNERDQHFVKAAMPEGARGFIDSIPALRNRECIVCGEGVSIPIRVYLDTLEEEKRPASSDPLFSKLWRETGGEAEIVERV
VKRWRSQGR

Sequences:

>Translated_569_residues
MDMQGGFGAGDSTAVQHVRLAGGGVAAPVTPGTAHHRDELLIGEVVDVSGSASRILLDAATIARLSSSGDATVAMAGQVG
AQVKVRVGNIWLVASIRDQQLHERGEGLILATIDLLGEGEEEKITGRIHNFRRGVTRYPVPGSPVFAATSADLKQIYAAD
ERAHVEIGTVHPTKDVRGSLYVDAMLGKHFALLGSTGTGKSTSAALILHKICELAPQGHIVMIDPHGEYSAAFKGTGALF
DVDNLAMPYWLMNFEEHCEVFVTAEGRDRQADCDVLARCLLQARIKNRLAEGMTKITVDSPIPYLLSDLLSILTNEMGKL
DKATSSAPFMRIKGKIEEMRADPRYNFMFSGMLVADTMANFLSKIFRLPSDGRPISIIDVSGVPSDITGVVVAVLSRLTF
DYAIWSRGEPQRPILLVCEEAHRYIPSKDIGQGQAVRKILERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTIIAMRL
NNERDQHFVKAAMPEGARGFIDSIPALRNRECIVCGEGVSIPIRVYLDTLEEEKRPASSDPLFSKLWRETGGEAEIVERV
VKRWRSQGR
>Mature_569_residues
MDMQGGFGAGDSTAVQHVRLAGGGVAAPVTPGTAHHRDELLIGEVVDVSGSASRILLDAATIARLSSSGDATVAMAGQVG
AQVKVRVGNIWLVASIRDQQLHERGEGLILATIDLLGEGEEEKITGRIHNFRRGVTRYPVPGSPVFAATSADLKQIYAAD
ERAHVEIGTVHPTKDVRGSLYVDAMLGKHFALLGSTGTGKSTSAALILHKICELAPQGHIVMIDPHGEYSAAFKGTGALF
DVDNLAMPYWLMNFEEHCEVFVTAEGRDRQADCDVLARCLLQARIKNRLAEGMTKITVDSPIPYLLSDLLSILTNEMGKL
DKATSSAPFMRIKGKIEEMRADPRYNFMFSGMLVADTMANFLSKIFRLPSDGRPISIIDVSGVPSDITGVVVAVLSRLTF
DYAIWSRGEPQRPILLVCEEAHRYIPSKDIGQGQAVRKILERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTIIAMRL
NNERDQHFVKAAMPEGARGFIDSIPALRNRECIVCGEGVSIPIRVYLDTLEEEKRPASSDPLFSKLWRETGGEAEIVERV
VKRWRSQGR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJECL08 and MJ1429 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571
- InterPro:   IPR002789
- InterPro:   IPR018538 [H]

Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]

EC number: NA

Molecular weight: Translated: 61922; Mature: 61922

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMQGGFGAGDSTAVQHVRLAGGGVAAPVTPGTAHHRDELLIGEVVDVSGSASRILLDAA
CCCCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEHH
TIARLSSSGDATVAMAGQVGAQVKVRVGNIWLVASIRDQQLHERGEGLILATIDLLGEGE
HHHHHCCCCCEEEEEECCCCCEEEEEECCEEEEEECCHHHHHHHCCEEEEEEEEECCCCC
EEKITGRIHNFRRGVTRYPVPGSPVFAATSADLKQIYAADERAHVEIGTVHPTKDVRGSL
HHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE
YVDAMLGKHFALLGSTGTGKSTSAALILHKICELAPQGHIVMIDPHGEYSAAFKGTGALF
EEEHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCEE
DVDNLAMPYWLMNFEEHCEVFVTAEGRDRQADCDVLARCLLQARIKNRLAEGMTKITVDS
ECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
PIPYLLSDLLSILTNEMGKLDKATSSAPFMRIKGKIEEMRADPRYNFMFSGMLVADTMAN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCEEEECCHHHHHHHHH
FLSKIFRLPSDGRPISIIDVSGVPSDITGVVVAVLSRLTFDYAIWSRGEPQRPILLVCEE
HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEH
AHRYIPSKDIGQGQAVRKILERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTIIAMRL
HHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCEEEEEEECCCHHHHHHHHHCCCEEEEEEE
NNERDQHFVKAAMPEGARGFIDSIPALRNRECIVCGEGVSIPIRVYLDTLEEEKRPASSD
CCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHCCCCCCC
PLFSKLWRETGGEAEIVERVVKRWRSQGR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDMQGGFGAGDSTAVQHVRLAGGGVAAPVTPGTAHHRDELLIGEVVDVSGSASRILLDAA
CCCCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEHH
TIARLSSSGDATVAMAGQVGAQVKVRVGNIWLVASIRDQQLHERGEGLILATIDLLGEGE
HHHHHCCCCCEEEEEECCCCCEEEEEECCEEEEEECCHHHHHHHCCEEEEEEEEECCCCC
EEKITGRIHNFRRGVTRYPVPGSPVFAATSADLKQIYAADERAHVEIGTVHPTKDVRGSL
HHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE
YVDAMLGKHFALLGSTGTGKSTSAALILHKICELAPQGHIVMIDPHGEYSAAFKGTGALF
EEEHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCEE
DVDNLAMPYWLMNFEEHCEVFVTAEGRDRQADCDVLARCLLQARIKNRLAEGMTKITVDS
ECCCCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
PIPYLLSDLLSILTNEMGKLDKATSSAPFMRIKGKIEEMRADPRYNFMFSGMLVADTMAN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCEEEECCHHHHHHHHH
FLSKIFRLPSDGRPISIIDVSGVPSDITGVVVAVLSRLTFDYAIWSRGEPQRPILLVCEE
HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEH
AHRYIPSKDIGQGQAVRKILERIAKEGRKYGVSLGLITQRPSDLAEGVLSQCGTIIAMRL
HHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCEEEEEEECCCHHHHHHHHHCCCEEEEEEE
NNERDQHFVKAAMPEGARGFIDSIPALRNRECIVCGEGVSIPIRVYLDTLEEEKRPASSD
CCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHCCCCCCC
PLFSKLWRETGGEAEIVERVVKRWRSQGR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]