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The map label for this gene is rimP

Identifier: 103486102

GI number: 103486102

Start: 619301

End: 619846

Strand: Direct

Name: rimP

Synonym: Sala_0609

Alternate gene names: 103486102

Gene position: 619301-619846 (Clockwise)

Preceding gene: 103486098

Following gene: 103486103

Centisome position: 18.51

GC content: 66.12

Gene sequence:

>546_bases
TTGGTCGATTTCGACGCCCTCCATGCGATCATCGCGCCCGAAGCCGAGGCGATGGGCCTCGCGCTCGTGCGCGTCGCCTT
CTTTGGCGGCGACAGCGACCCGACCTTGCAGGTGATGGCCGAGCGGCCCGACACGCGCCAGCTGACGATCGATGATTGCG
CCGACCTGTCGCGCCGCATCTCGGACCGGCTCGACGCGCTGGAGGAAGCGGGGCAGGATCCGATCGACGTCGCCTATCGG
CTCGAGGTTTCGTCGCCCGGCATCGACCGGCCGCTGACGAGGCCCGCCGACTTCGCCGACTGGGCGGGTCACGAAGCGAA
GATCGCGCTCAAGGAAAAGCTGGACGGCCGCCAGCGCTTCAACGGCACGCTCGTCGGCATCGACGGCGATGTCGTGACGA
TTTCGGATAAGGAAGGGGTGGAGCACAAGCTGCCGTTCGGCGCGATCGACACGGCGAAGCTGGTGCTCACCGACAAATTG
ATTGCCGCAACCGTTCCGCTCTCCGCCGAGGGCGCCGACGAAATGGAAGAAGAAGGACAGGACTGA

Upstream 100 bases:

>100_bases
CCTCACTTCTTGACATGGTTAGCCAGTTGGGACGTCGGGGCCGCGGGCCGCGGCGGCTTTTCCTGCATGGCTTTCCGGTT
GTCCGAACCAGGAATATGAT

Downstream 100 bases:

>100_bases
TGGCCACTGCCATTTCCGCCAACAAGGCCGAACTGCTCGCGATCGCCAACAGCGTCGCCAGCGAGAAGATGATCGACAAG
GCTATCGTCATCGAGGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVDFDALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDALEEAGQDPIDVAYR
LEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTLVGIDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKL
IAATVPLSAEGADEMEEEGQD

Sequences:

>Translated_181_residues
MVDFDALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDALEEAGQDPIDVAYR
LEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTLVGIDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKL
IAATVPLSAEGADEMEEEGQD
>Mature_181_residues
MVDFDALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDALEEAGQDPIDVAYR
LEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTLVGIDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKL
IAATVPLSAEGADEMEEEGQD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=35.5704697986577, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_SPHAL (Q1GVJ2)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615663.1
- ProteinModelPortal:   Q1GVJ2
- SMR:   Q1GVJ2
- GeneID:   4082545
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0609
- NMPDR:   fig|317655.9.peg.565
- HOGENOM:   HBG668072
- OMA:   TVQIMAD
- ProtClustDB:   PRK14636
- BioCyc:   SALA317655:SALA_0609-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19542; Mature: 19542

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFDALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRI
CCCHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCCCEEEHHHHHHHHHHH
SDRLDALEEAGQDPIDVAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRF
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCEEEEHHHHCCCHHHH
NGTLVGIDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKLIAATVPLSAEGADEMEEEGQ
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHEEHHHHHHEECCCCCCCCHHHHHCCC
D
C
>Mature Secondary Structure
MVDFDALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRI
CCCHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCCCEEEHHHHHHHHHHH
SDRLDALEEAGQDPIDVAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRF
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHCCCCCEEEEHHHHCCCHHHH
NGTLVGIDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKLIAATVPLSAEGADEMEEEGQ
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHEEHHHHHHEECCCCCCCCHHHHHCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA