Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is phhA [H]
Identifier: 103486046
GI number: 103486046
Start: 567703
End: 568572
Strand: Direct
Name: phhA [H]
Synonym: Sala_0553
Alternate gene names: 103486046
Gene position: 567703-568572 (Clockwise)
Preceding gene: 103486045
Following gene: 103486051
Centisome position: 16.97
GC content: 62.41
Gene sequence:
>870_bases ATGGAAAGCCGGTTTACCCACGTCCACGAAACCCCGCCGCCGGGCGCCGCGGCCGACTGGACGATTTCGCAGAATTGGGA CGCCTTCACCGCCGACGAACATGCGATGTGGGACCGGCTGTTCGCGCGCCAGTCGGCGATGTTGCCCGGCCGCGCGGCCG ACGCATTTATGCGCGGCATCGACGTGCTCAAGCTGGAAAAGCCGGGCATTCCCGATTACCGCGAGCTCAACGCGCGGCTG ATGGCGGCGACGGGGTGGCAGGTTGTCGCGGTGCCGGGACTGGTTCCCGACGACGTGTTTTTCGATCATCTGGCAAACCG GCGCTTTCCCGCGGGCAATTTCATCCGCACACCCGACCAGCTCGATTACCTCCAGGAACCCGACGTCTTTCACGACGTCT TCGGCCATGTCCCGATGCTCGCCGACCCGGTTTTCGCCGATTATATGGTCGCCTATGGCGAGGGCGGACTGCGCAGCCTG AAGTTTGATGCGCTCAAACAGCTGGCGCGGCTCTATTGGTATACGGTCGAATTCGGGCTGATCCGCGAAGCCGGCGGCCT GCGCATCTATGGCGCCGGGATCGTTTCCTCCTATGCAGAAAGCGTCTTCGCGCTCGACAGCGAGAGCCCGAACCGCCTCG GCTTCGACCTCGCGCGCGTCATGCGCACCGATTACCGGATCGACGATTTCCAGCAGAATTATTTTGTCATCGACAGTCTG GAACAGTTGCTCGACATAACCGTGAATACCGATTTCGCGCCGCTCTATGCCGCGAACGCCGCACTGCCGCCGATCCCCAT TGCCGACATATTGCCGGACGACAAGGTGATCACGCGCGGCACCCAGGAATATGCCGCTGCGAAGGCCTGA
Upstream 100 bases:
>100_bases TCAGCCACGATCACGCCGAGGTCGACCGGCTCGCAACATCGGTCGTCGCGATCGGCGAATAAGTTTCACATGAAACCATA TTTGTGATAGAAGTCTGTCC
Downstream 100 bases:
>100_bases TACCGAAACGTCATTGCGAGCGTAGCGAAGCAATCGCCAGCTGTCGGAGAGGCCGTCGATAGCGGGAGATTGCTTGCTCG CTTCGCTCCTCGCAATGACG
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MESRFTHVHETPPPGAAADWTISQNWDAFTADEHAMWDRLFARQSAMLPGRAADAFMRGIDVLKLEKPGIPDYRELNARL MAATGWQVVAVPGLVPDDVFFDHLANRRFPAGNFIRTPDQLDYLQEPDVFHDVFGHVPMLADPVFADYMVAYGEGGLRSL KFDALKQLARLYWYTVEFGLIREAGGLRIYGAGIVSSYAESVFALDSESPNRLGFDLARVMRTDYRIDDFQQNYFVIDSL EQLLDITVNTDFAPLYAANAALPPIPIADILPDDKVITRGTQEYAAAKA
Sequences:
>Translated_289_residues MESRFTHVHETPPPGAAADWTISQNWDAFTADEHAMWDRLFARQSAMLPGRAADAFMRGIDVLKLEKPGIPDYRELNARL MAATGWQVVAVPGLVPDDVFFDHLANRRFPAGNFIRTPDQLDYLQEPDVFHDVFGHVPMLADPVFADYMVAYGEGGLRSL KFDALKQLARLYWYTVEFGLIREAGGLRIYGAGIVSSYAESVFALDSESPNRLGFDLARVMRTDYRIDDFQQNYFVIDSL EQLLDITVNTDFAPLYAANAALPPIPIADILPDDKVITRGTQEYAAAKA >Mature_289_residues MESRFTHVHETPPPGAAADWTISQNWDAFTADEHAMWDRLFARQSAMLPGRAADAFMRGIDVLKLEKPGIPDYRELNARL MAATGWQVVAVPGLVPDDVFFDHLANRRFPAGNFIRTPDQLDYLQEPDVFHDVFGHVPMLADPVFADYMVAYGEGGLRSL KFDALKQLARLYWYTVEFGLIREAGGLRIYGAGIVSSYAESVFALDSESPNRLGFDLARVMRTDYRIDDFQQNYFVIDSL EQLLDITVNTDFAPLYAANAALPPIPIADILPDDKVITRGTQEYAAAKA
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI4759248, Length=265, Percent_Identity=29.811320754717, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI88900505, Length=221, Percent_Identity=32.1266968325792, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI88900501, Length=221, Percent_Identity=32.1266968325792, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI88900503, Length=221, Percent_Identity=32.1266968325792, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI31795563, Length=218, Percent_Identity=31.651376146789, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI4557819, Length=218, Percent_Identity=30.2752293577982, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71980736, Length=222, Percent_Identity=32.4324324324324, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17531391, Length=220, Percent_Identity=34.0909090909091, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI115532103, Length=231, Percent_Identity=29.004329004329, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115533973, Length=231, Percent_Identity=29.004329004329, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71980731, Length=151, Percent_Identity=27.8145695364238, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI62472054, Length=227, Percent_Identity=33.0396475770925, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24660393, Length=227, Percent_Identity=33.0396475770925, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI17136776, Length=219, Percent_Identity=31.0502283105023, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI17136774, Length=219, Percent_Identity=31.0502283105023, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24654994, Length=175, Percent_Identity=33.1428571428571, Blast_Score=98, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 32370; Mature: 32370
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRFTHVHETPPPGAAADWTISQNWDAFTADEHAMWDRLFARQSAMLPGRAADAFMRGI CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DVLKLEKPGIPDYRELNARLMAATGWQVVAVPGLVPDDVFFDHLANRRFPAGNFIRTPDQ CEEEECCCCCCCHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHH LDYLQEPDVFHDVFGHVPMLADPVFADYMVAYGEGGLRSLKFDALKQLARLYWYTVEFGL HHHCCCCHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IREAGGLRIYGAGIVSSYAESVFALDSESPNRLGFDLARVMRTDYRIDDFQQNYFVIDSL EECCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHH EQLLDITVNTDFAPLYAANAALPPIPIADILPDDKVITRGTQEYAAAKA HHHHHHHCCCCCCHHHCCCCCCCCCCHHHCCCCCCHHHCCCHHHHHCCC >Mature Secondary Structure MESRFTHVHETPPPGAAADWTISQNWDAFTADEHAMWDRLFARQSAMLPGRAADAFMRGI CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DVLKLEKPGIPDYRELNARLMAATGWQVVAVPGLVPDDVFFDHLANRRFPAGNFIRTPDQ CEEEECCCCCCCHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHH LDYLQEPDVFHDVFGHVPMLADPVFADYMVAYGEGGLRSLKFDALKQLARLYWYTVEFGL HHHCCCCHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IREAGGLRIYGAGIVSSYAESVFALDSESPNRLGFDLARVMRTDYRIDDFQQNYFVIDSL EECCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHH EQLLDITVNTDFAPLYAANAALPPIPIADILPDDKVITRGTQEYAAAKA HHHHHHHCCCCCCHHHCCCCCCCCCCHHHCCCCCCHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]