| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is modC [H]
Identifier: 103486045
GI number: 103486045
Start: 567044
End: 567664
Strand: Direct
Name: modC [H]
Synonym: Sala_0552
Alternate gene names: 103486045
Gene position: 567044-567664 (Clockwise)
Preceding gene: 103486044
Following gene: 103486046
Centisome position: 16.95
GC content: 66.34
Gene sequence:
>621_bases ATGACGATTGAGATCGACGTCGAAAAACGACGTGGCGACCGCGTCATCGCCGCGCGCTTCTCAGCGGGGCCGGGGCTGAC CGCGCTGTTCGGCCCGTCGGGTGTGGGCAAGACGAGCATATTCGACATGGTCGCCGGGCTGCTGCGCCCTGATCGCGGGC ATATCCGCATCGGCGACCGTATTTTATTCGATGCCGAGACCGATCTGCCGCCCGAAGCGCGCCGCATCGGTTATGTCTTT CAGGACGGGCGACTGTTCCCGCACAGGCGGGTGCGCGCGAATCTTCTCTACGGCCACGCGCTTGCGCCGCAGGCGAACCG CTGGATGACGCTCGAAGAGGCGGCCGGCTTCCTCGGCATCGGCCATCTTTTCGACCGCTGGCCGCAAAGCCTGTCGGGCG GGGAGGCGCAGCGCGTCGCGATCGGTCGCGCGCTGCTCGCCGGTCCCGACATATTGCTGATGGACGAACCGCTCTCGTCA CTCGACGCGGCGCGGCGCGGCGACATCATGGCGGTGATCGAGCGGATTCGCGACGAGCTTCGGCTCCCCATTCTCTACGT CAGCCACGATCACGCCGAGGTCGACCGGCTCGCAACATCGGTCGTCGCGATCGGCGAATAA
Upstream 100 bases:
>100_bases ACGGTGACGCGGCTCGCGCTTTTGTCGGTTGCCCTGTCGCTCGGTGCGCTGCTCGCCTCCGAATGGCTGGTGCGGCGCAG CCATGTCGGACGGCGCGCGC
Downstream 100 bases:
>100_bases GTTTCACATGAAACCATATTTGTGATAGAAGTCTGTCCATGGAAAGCCGGTTTACCCACGTCCACGAAACCCCGCCGCCG GGCGCCGCGGCCGACTGGAC
Product: ABC transporter related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTIEIDVEKRRGDRVIAARFSAGPGLTALFGPSGVGKTSIFDMVAGLLRPDRGHIRIGDRILFDAETDLPPEARRIGYVF QDGRLFPHRRVRANLLYGHALAPQANRWMTLEEAAGFLGIGHLFDRWPQSLSGGEAQRVAIGRALLAGPDILLMDEPLSS LDAARRGDIMAVIERIRDELRLPILYVSHDHAEVDRLATSVVAIGE
Sequences:
>Translated_206_residues MTIEIDVEKRRGDRVIAARFSAGPGLTALFGPSGVGKTSIFDMVAGLLRPDRGHIRIGDRILFDAETDLPPEARRIGYVF QDGRLFPHRRVRANLLYGHALAPQANRWMTLEEAAGFLGIGHLFDRWPQSLSGGEAQRVAIGRALLAGPDILLMDEPLSS LDAARRGDIMAVIERIRDELRLPILYVSHDHAEVDRLATSVVAIGE >Mature_205_residues TIEIDVEKRRGDRVIAARFSAGPGLTALFGPSGVGKTSIFDMVAGLLRPDRGHIRIGDRILFDAETDLPPEARRIGYVFQ DGRLFPHRRVRANLLYGHALAPQANRWMTLEEAAGFLGIGHLFDRWPQSLSGGEAQRVAIGRALLAGPDILLMDEPLSSL DAARRGDIMAVIERIRDELRLPILYVSHDHAEVDRLATSVVAIGE
Specific function: Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system [H]
COG id: COG4148
COG function: function code P; ABC-type molybdate transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=186, Percent_Identity=31.7204301075269, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI105990541, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27881501, Length=180, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI30795238, Length=180, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI11967971, Length=183, Percent_Identity=28.9617486338798, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI42490749, Length=156, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9961250, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4505771, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961252, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI62526033, Length=193, Percent_Identity=27.4611398963731, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI171184400, Length=164, Percent_Identity=32.9268292682927, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI9955963, Length=170, Percent_Identity=34.7058823529412, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786981, Length=207, Percent_Identity=45.4106280193237, Blast_Score=147, Evalue=3e-37, Organism=Escherichia coli, GI1790467, Length=181, Percent_Identity=39.7790055248619, Blast_Score=130, Evalue=6e-32, Organism=Escherichia coli, GI87082267, Length=178, Percent_Identity=38.2022471910112, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1788761, Length=187, Percent_Identity=35.2941176470588, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87081709, Length=185, Percent_Identity=36.7567567567568, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787712, Length=177, Percent_Identity=35.5932203389831, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786253, Length=181, Percent_Identity=34.8066298342541, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787370, Length=181, Percent_Identity=35.3591160220994, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788450, Length=186, Percent_Identity=37.6344086021505, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI1788225, Length=178, Percent_Identity=34.2696629213483, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786398, Length=181, Percent_Identity=33.7016574585635, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081791, Length=173, Percent_Identity=33.5260115606936, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786872, Length=179, Percent_Identity=32.4022346368715, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786563, Length=182, Percent_Identity=34.6153846153846, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI1788053, Length=180, Percent_Identity=36.6666666666667, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787164, Length=180, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787089, Length=188, Percent_Identity=34.0425531914894, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789962, Length=188, Percent_Identity=29.2553191489362, Blast_Score=84, Evalue=5e-18, Organism=Escherichia coli, GI1787029, Length=186, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789032, Length=175, Percent_Identity=34.8571428571429, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786703, Length=170, Percent_Identity=34.1176470588235, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787105, Length=169, Percent_Identity=28.9940828402367, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789586, Length=210, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=30.8080808080808, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787500, Length=188, Percent_Identity=27.1276595744681, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789593, Length=177, Percent_Identity=37.8531073446328, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1786803, Length=190, Percent_Identity=30, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789873, Length=192, Percent_Identity=31.25, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87081834, Length=187, Percent_Identity=30.4812834224599, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786698, Length=170, Percent_Identity=31.1764705882353, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789864, Length=201, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789672, Length=142, Percent_Identity=34.5070422535211, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI145693107, Length=195, Percent_Identity=32.3076923076923, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790162, Length=201, Percent_Identity=29.8507462686567, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI1788897, Length=190, Percent_Identity=28.4210526315789, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI1790544, Length=197, Percent_Identity=29.9492385786802, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1789891, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787547, Length=194, Percent_Identity=25.2577319587629, Blast_Score=68, Evalue=3e-13, Organism=Escherichia coli, GI48994883, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788506, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=174, Percent_Identity=31.0344827586207, Blast_Score=66, Evalue=1e-12, Organism=Escherichia coli, GI1788644, Length=171, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1788210, Length=184, Percent_Identity=30.9782608695652, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1786345, Length=198, Percent_Identity=29.2929292929293, Blast_Score=63, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17565586, Length=182, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17541710, Length=175, Percent_Identity=33.7142857142857, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211017, Length=207, Percent_Identity=32.8502415458937, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193211015, Length=207, Percent_Identity=32.8502415458937, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17558664, Length=163, Percent_Identity=33.7423312883436, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534520, Length=185, Percent_Identity=33.5135135135135, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71996809, Length=207, Percent_Identity=32.3671497584541, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193208177, Length=179, Percent_Identity=30.7262569832402, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25146777, Length=199, Percent_Identity=30.6532663316583, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510237, Length=174, Percent_Identity=24.7126436781609, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71983523, Length=175, Percent_Identity=27.4285714285714, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71983516, Length=175, Percent_Identity=27.4285714285714, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71983510, Length=175, Percent_Identity=27.4285714285714, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324985, Length=198, Percent_Identity=26.7676767676768, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319856, Length=180, Percent_Identity=30, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581191, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24581189, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24581193, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24581195, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI85726357, Length=156, Percent_Identity=32.6923076923077, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI19920532, Length=164, Percent_Identity=26.219512195122, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24580930, Length=164, Percent_Identity=26.219512195122, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574533, Length=179, Percent_Identity=25.6983240223464, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641565, Length=165, Percent_Identity=32.1212121212121, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI221512771, Length=184, Percent_Identity=25.5434782608696, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015852 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR011868 - InterPro: IPR005116 [H]
Pfam domain/function: PF00005 ABC_tran; PF03459 TOBE [H]
EC number: =3.6.3.29 [H]
Molecular weight: Translated: 22680; Mature: 22549
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEIDVEKRRGDRVIAARFSAGPGLTALFGPSGVGKTSIFDMVAGLLRPDRGHIRIGDR CEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCE ILFDAETDLPPEARRIGYVFQDGRLFPHRRVRANLLYGHALAPQANRWMTLEEAAGFLGI EEEECCCCCCCCHHHEEEEEECCEECCCHHHEEEEEECCEECCCCCCEEEHHHHCCCEEH GHLFDRWPQSLSGGEAQRVAIGRALLAGPDILLMDEPLSSLDAARRGDIMAVIERIRDEL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHH RLPILYVSHDHAEVDRLATSVVAIGE CCCEEEEECCHHHHHHHHHHHHEECC >Mature Secondary Structure TIEIDVEKRRGDRVIAARFSAGPGLTALFGPSGVGKTSIFDMVAGLLRPDRGHIRIGDR EEEEEECCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCE ILFDAETDLPPEARRIGYVFQDGRLFPHRRVRANLLYGHALAPQANRWMTLEEAAGFLGI EEEECCCCCCCCHHHEEEEEECCEECCCHHHEEEEEECCEECCCCCCEEEHHHHCCCEEH GHLFDRWPQSLSGGEAQRVAIGRALLAGPDILLMDEPLSSLDAARRGDIMAVIERIRDEL HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHH RLPILYVSHDHAEVDRLATSVVAIGE CCCEEEEECCHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]