Definition | Sphingopyxis alaskensis RB2256, complete genome. |
---|---|
Accession | NC_008048 |
Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is modA [H]
Identifier: 103486043
GI number: 103486043
Start: 565595
End: 566359
Strand: Direct
Name: modA [H]
Synonym: Sala_0550
Alternate gene names: 103486043
Gene position: 565595-566359 (Clockwise)
Preceding gene: 103486042
Following gene: 103486044
Centisome position: 16.91
GC content: 72.29
Gene sequence:
>765_bases ATGGCTTTTGTCCTTCGCCTGCTTCTCGCGCTCGCCGGGCTGTTGCTGACGCCTGCCGGTGCGGCGGCGGCGCGGGGGCC GGTCGTGCTCGCGGCGGCGAGCCTGCAGGAATCGCTCACCGAAGCGGCGAACGTCTGGGCGGCGCGGGGGCATCCGAAAC CCCTGCTGTCCTTCGCCGCCTCGTCGGCGCTCGCGCGGCAGGTCATTGCCGGGGCGCCCGCCGACATCTTCCTCTCGGCC GACGAACCGTGGATGGATGCGGTCGCGAAGGCGGGCAGGCTCCGCGCGGGGACGCGAGTCAGGTTGGTCGGCAATCGCCT CGTGCTGATCGCACCCGCCGCGAGCAAGGTCCGGCTGACCCCGGCGCACGGCTTTCCACTCGCCCGAGCGCTCGGTTCCG GCCGTCTCGCCATCGCCGACCCCGATGCGGTGCCTGCGGGCCGCTATGCGAGGGCAGCGCTGGCGCATCTCGGCGTGTGG GGCAGCGTCGCGGGCAGGCTCGCGCCCGCCGAAAATGTCCGCGCCACGCTGGCACTCGTCGAGCGCGGTGCCGCGCCGCT CGGCATCGTCTATGCGACCGACGCGCACGCGTCGAAAGCGGTGCGGATCGTCGGCAGCTTTCCCGCCGCGAGCCACCCGC CGATCCGCTATCCGCTGGCGGTGCTGAAAACATCGCGGCACCGCGACGCCGCGGCCTTTCGTGCCTTCCTCTTGTCCAGC CAAGGCCGCGCGATATTTGCGCGCCACGGTTTTTCGGCGCCGTGA
Upstream 100 bases:
>100_bases TGAGGATATTTCCATGACAAAATAGCCGGCACACGCCGCTCTGCGCGGCGTGCCGGCTGAGCGTTGCGGCAAGAGGCCCG GCGCGCCTATAGTCGACAGC
Downstream 100 bases:
>100_bases TGCTGACCGCCGAGGAATGGGGGATCGTCGCATTGTCGCTCAAGGTCGGCGGGCTCGCGGTGCTCGCGACGCTGCCGCTT GCCTTCGTTGTCGCGTGGAC
Product: molybdenum ABC transporter, periplasmic molybdate-binding protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAFVLRLLLALAGLLLTPAGAAAARGPVVLAAASLQESLTEAANVWAARGHPKPLLSFAASSALARQVIAGAPADIFLSA DEPWMDAVAKAGRLRAGTRVRLVGNRLVLIAPAASKVRLTPAHGFPLARALGSGRLAIADPDAVPAGRYARAALAHLGVW GSVAGRLAPAENVRATLALVERGAAPLGIVYATDAHASKAVRIVGSFPAASHPPIRYPLAVLKTSRHRDAAAFRAFLLSS QGRAIFARHGFSAP
Sequences:
>Translated_254_residues MAFVLRLLLALAGLLLTPAGAAAARGPVVLAAASLQESLTEAANVWAARGHPKPLLSFAASSALARQVIAGAPADIFLSA DEPWMDAVAKAGRLRAGTRVRLVGNRLVLIAPAASKVRLTPAHGFPLARALGSGRLAIADPDAVPAGRYARAALAHLGVW GSVAGRLAPAENVRATLALVERGAAPLGIVYATDAHASKAVRIVGSFPAASHPPIRYPLAVLKTSRHRDAAAFRAFLLSS QGRAIFARHGFSAP >Mature_253_residues AFVLRLLLALAGLLLTPAGAAAARGPVVLAAASLQESLTEAANVWAARGHPKPLLSFAASSALARQVIAGAPADIFLSAD EPWMDAVAKAGRLRAGTRVRLVGNRLVLIAPAASKVRLTPAHGFPLARALGSGRLAIADPDAVPAGRYARAALAHLGVWG SVAGRLAPAENVRATLALVERGAAPLGIVYATDAHASKAVRIVGSFPAASHPPIRYPLAVLKTSRHRDAAAFRAFLLSSQ GRAIFARHGFSAP
Specific function: Involved in the transport of molybdenum into the cell. Binds molybdate with high specificity and affinity [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
Organism=Escherichia coli, GI1786979, Length=248, Percent_Identity=45.1612903225806, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 26101; Mature: 25969
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVLRLLLALAGLLLTPAGAAAARGPVVLAAASLQESLTEAANVWAARGHPKPLLSFAA CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SSALARQVIAGAPADIFLSADEPWMDAVAKAGRLRAGTRVRLVGNRLVLIAPAASKVRLT HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCEEEE PAHGFPLARALGSGRLAIADPDAVPAGRYARAALAHLGVWGSVAGRLAPAENVRATLALV CCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ERGAAPLGIVYATDAHASKAVRIVGSFPAASHPPIRYPLAVLKTSRHRDAAAFRAFLLSS HCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCC QGRAIFARHGFSAP CCCEEEEECCCCCC >Mature Secondary Structure AFVLRLLLALAGLLLTPAGAAAARGPVVLAAASLQESLTEAANVWAARGHPKPLLSFAA HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SSALARQVIAGAPADIFLSADEPWMDAVAKAGRLRAGTRVRLVGNRLVLIAPAASKVRLT HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCEEEE PAHGFPLARALGSGRLAIADPDAVPAGRYARAALAHLGVWGSVAGRLAPAENVRATLALV CCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ERGAAPLGIVYATDAHASKAVRIVGSFPAASHPPIRYPLAVLKTSRHRDAAAFRAFLLSS HCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCC QGRAIFARHGFSAP CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860583; 8564363; 8905232; 9278503; 8576221; 9302996 [H]