Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is rimI [C]
Identifier: 103486040
GI number: 103486040
Start: 561973
End: 562659
Strand: Direct
Name: rimI [C]
Synonym: Sala_0547
Alternate gene names: 103486040
Gene position: 561973-562659 (Clockwise)
Preceding gene: 103486039
Following gene: 103486041
Centisome position: 16.8
GC content: 70.89
Gene sequence:
>687_bases GTGACCGTCCTTCATCCCCTCGACCGCCCCATCTGGTCGATGCTCACCGGGCGGCAGGCGCATCTGGCGGAGGGCGACGC GCGGGCGCTCAGGATCGATCGCGGTTATGGCGTGTTCGGGGTGGCCGCCGACACCGGCGCTGCGGCGCAGGCGGCGCTGG CCGCGCTGGTGCCCGATGACGGCGAGCTCTGGATCGTCGAGGGCGATCCCTGGCCCGTACCGCCGGGCGTGCGCGAGGTG AGGCGCGCGGTGCTGGCGCAGATGGTTGCCGACGGACCGCCGCCCGCGCCGCGCGACGGCGAACCGCCGATCGTCGCTTT GCACGATTCGGATGCACCCGAAATGGCGGCGCTTGCCGACCATGCGAAACCCGGGCCGTGGGGACCGGCGACGCACCGCT ACGGTCCCTTTTTCGGCGTTCGCGAGGATGGCCGCCTGCTCGCGATGGCGGGGCAAAGGATGTTGATGCCCGGGATGGCC GAGGTCAGTGGCGTCGCGACCTGGGCCGATTGTCGCGGCCGCGGGCTGGCGCGCGCGCTGATCGGCCATGTCATGCGCGC GATGGTGGCGCGCGGCGAAACGCCGTTCCTGCACAGCTATGCCGACAATGCGGGCGCGATTGCGCTGTATGAATCCCTGG GCTTTCGGATTCGACGCGAAGTGCATGTGCTGGTGATCGCGCGGTGA
Upstream 100 bases:
>100_bases ACGACGCCGGCCGCCGCGAAGAAATCGCCCGGATGCTGTCGGGTGCCGAAGTGACCGAGGAAGCAAGGGCACAGGCCGAG CGGCTGTTGGAGGTGGCGGC
Downstream 100 bases:
>100_bases TTACGTCTTGAAGTCCCTCCCCTTCAGGGGAGGGGTTGGGGTGGGGTTATGCGTCGTACGAAACGTAGCCATGTCATGTT GAGCTACGCTCACAAGATGC
Product: GCN5-related N-acetyltransferase
Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]
Alternate protein names: Acetyltransferase; FR47 Domain Protein; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; FR47 Domain-Containing Protein; GCN5-Like N-Acetyltransferase; Gnat Acetyltransferase; Acetyltransferase GNAT Family Protein; Acyltransferase; LOW QUALITY PROTEIN Acetyltransferase; FR47-Like Protein; Regulator Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTVLHPLDRPIWSMLTGRQAHLAEGDARALRIDRGYGVFGVAADTGAAAQAALAALVPDDGELWIVEGDPWPVPPGVREV RRAVLAQMVADGPPPAPRDGEPPIVALHDSDAPEMAALADHAKPGPWGPATHRYGPFFGVREDGRLLAMAGQRMLMPGMA EVSGVATWADCRGRGLARALIGHVMRAMVARGETPFLHSYADNAGAIALYESLGFRIRREVHVLVIAR
Sequences:
>Translated_228_residues MTVLHPLDRPIWSMLTGRQAHLAEGDARALRIDRGYGVFGVAADTGAAAQAALAALVPDDGELWIVEGDPWPVPPGVREV RRAVLAQMVADGPPPAPRDGEPPIVALHDSDAPEMAALADHAKPGPWGPATHRYGPFFGVREDGRLLAMAGQRMLMPGMA EVSGVATWADCRGRGLARALIGHVMRAMVARGETPFLHSYADNAGAIALYESLGFRIRREVHVLVIAR >Mature_227_residues TVLHPLDRPIWSMLTGRQAHLAEGDARALRIDRGYGVFGVAADTGAAAQAALAALVPDDGELWIVEGDPWPVPPGVREVR RAVLAQMVADGPPPAPRDGEPPIVALHDSDAPEMAALADHAKPGPWGPATHRYGPFFGVREDGRLLAMAGQRMLMPGMAE VSGVATWADCRGRGLARALIGHVMRAMVARGETPFLHSYADNAGAIALYESLGFRIRREVHVLVIAR
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG3393
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128 [C]
Molecular weight: Translated: 24351; Mature: 24220
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLHPLDRPIWSMLTGRQAHLAEGDARALRIDRGYGVFGVAADTGAAAQAALAALVPDD CCCCCCCCCHHHHHHCCCHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCC GELWIVEGDPWPVPPGVREVRRAVLAQMVADGPPPAPRDGEPPIVALHDSDAPEMAALAD CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH HAKPGPWGPATHRYGPFFGVREDGRLLAMAGQRMLMPGMAEVSGVATWADCRGRGLARAL CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHCCEEHHHHCCCHHHHHH IGHVMRAMVARGETPFLHSYADNAGAIALYESLGFRIRREVHVLVIAR HHHHHHHHHHCCCCCEEEHHCCCCCEEEEEHHHCHHEEEEEEEEEEEC >Mature Secondary Structure TVLHPLDRPIWSMLTGRQAHLAEGDARALRIDRGYGVFGVAADTGAAAQAALAALVPDD CCCCCCCCHHHHHHCCCHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCC GELWIVEGDPWPVPPGVREVRRAVLAQMVADGPPPAPRDGEPPIVALHDSDAPEMAALAD CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH HAKPGPWGPATHRYGPFFGVREDGRLLAMAGQRMLMPGMAEVSGVATWADCRGRGLARAL CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHCCEEHHHHCCCHHHHHH IGHVMRAMVARGETPFLHSYADNAGAIALYESLGFRIRREVHVLVIAR HHHHHHHHHHCCCCCEEEHHCCCCCEEEEEHHHCHHEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]
Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA