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The map label for this gene is recN [H]

Identifier: 103486039

GI number: 103486039

Start: 560306

End: 561976

Strand: Direct

Name: recN [H]

Synonym: Sala_0546

Alternate gene names: 103486039

Gene position: 560306-561976 (Clockwise)

Preceding gene: 103486038

Following gene: 103486040

Centisome position: 16.75

GC content: 71.87

Gene sequence:

>1671_bases
GTGCTGACCGCATTGTCCATCGCCAACATCGTTCTGATCGAGCGGCTCGACCTCGATTTCGAGGCCGGGCTGGGCGTGTT
GACCGGCGAGACGGGGGCCGGCAAGTCGATCCTGCTCGACGCACTGGGCCTTGCGCTCGGCGCGCGTGCCGACAGCGCGC
TGGTGCGGCAGGGCACCGACCGGGCGCAGGTCACCGCCAGCTTTGCGCCGCCCGCCGCGGGCAGTCCGCTTGCGACGCTG
CTTGCCGACAATGACATCACGCAGGGCGTCGGCGAGCCGTTGATCATTCGCCGCACATTGAAGGCCGATGGTGGTAGTCG
TGCCTTTTTGAACGACCAGCCCTGCTCGGCGGCGCTGCTGCGCGAGGTCGGCGGACATCTCGTTGAAATCCACGGCCAGC
ACGACGACCGCGGGCTGCTCGCGCCCGCGGGGCACCGCGCGCTGCTCGACGCCTATGCGCGCGCCGACACCGCCGCGGTC
GCCGCGGCCCACGCGGCATGGCGCGCCGCCGAGGCGAAGCTCGCTGCCGCGCGCGCCGCCATCGCCGAAGCCGAGCGCGA
CCGCGAGTGGCTCGAACATTGCGTCGCCGAACTCCAGGCGCTCGCGCCTCAGCCCGGCGAAGAGGCCGAACTCGCCGAAG
CGCGCGCCGCGATGCAAAAGGGCGAGCGGCTTGCGGGCGATCTGGGCGCGATCCTTGAGGTCTTCGACGGCAGCGACGGC
GGCCCCGCGCTGCTGCGCGGCGCGGCGCGGCGGCTCGACCGGCTCGCGGGCGATCATGCGCTGCTCGCCGAGGCGCTCGC
GGCGCTCGACCGCGCGATCATCGAGGCCGACGAGGCGGAGACGAAGCTGCACGAAGCCGCCCGCGCGATGGAATATGACC
CCGAACGGCTCGACGCGACCGAGACGCGCCTGTTCGAACTGCGCGCGATGGCGCGCAAGCACGCCTGCCAGCCCGACGAG
CTTGCCGACCTCACGGGCACGCTCGCCGCGCGGCTCGACGCGATCGAGGGCGGCAGCGCGGGACTCGCGCGGCTCGAGGC
CGCGGTTGCCGAAAGTGCCGCCGCCTATACCCGCGCCGCGACTGTGCTGTCCGATCAGCGCGCGAAGGCGGCGGCGCGGC
TCGACGCGGCGGTGGCGGACGAGTTGGCGCCCTTGAAACTCGACGCCGCGCGCTTCCGGACGCTTGTCGAGCGGCTTCCC
GCCGACCGCTGGGGGCCAGGGGGCATCGACCGCGTCGAGTTCCTGATCGCGACAAATCCCGGCGCGCCTTTTGCCCCGCT
GGCGAAGATTGCGAGCGGCGGCGAATTGTCGCGCTTCATCCTTGCGCTCAAGGTCGCGCTCGCCGAAGAGGGCGGCGCCG
ACACGATCATCTTCGACGAAATCGACCGCGGCGTCGGCGGCGCCGTCGCAAGCGCGATCGGCGAGCGGCTGGCAAGACTC
GCCGGTGCGGGCAAGCAATTGCTGGCGGTGACGCACAGTCCGCAGGTCGCGGCCAAGGGCGCCTTCCATTTCGTCATCGC
CAAGTCGAGCGAGGGGACCGTCACGCGCACCAGCGTCCACACCCTCGACGACGCCGGCCGCCGCGAAGAAATCGCCCGGA
TGCTGTCGGGTGCCGAAGTGACCGAGGAAGCAAGGGCACAGGCCGAGCGGCTGTTGGAGGTGGCGGCGTGA

Upstream 100 bases:

>100_bases
ACTATCCCGGCAATGAATGGTATGAGCGTGCGTACAAACTGATGCAGAAGCACGCACCGAGCGCATAGATTCTGCCTTTG
TTCTGCGGTAAGGACGGCGC

Downstream 100 bases:

>100_bases
CCGTCCTTCATCCCCTCGACCGCCCCATCTGGTCGATGCTCACCGGGCGGCAGGCGCATCTGGCGGAGGGCGACGCGCGG
GCGCTCAGGATCGATCGCGG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MLTALSIANIVLIERLDLDFEAGLGVLTGETGAGKSILLDALGLALGARADSALVRQGTDRAQVTASFAPPAAGSPLATL
LADNDITQGVGEPLIIRRTLKADGGSRAFLNDQPCSAALLREVGGHLVEIHGQHDDRGLLAPAGHRALLDAYARADTAAV
AAAHAAWRAAEAKLAAARAAIAEAERDREWLEHCVAELQALAPQPGEEAELAEARAAMQKGERLAGDLGAILEVFDGSDG
GPALLRGAARRLDRLAGDHALLAEALAALDRAIIEADEAETKLHEAARAMEYDPERLDATETRLFELRAMARKHACQPDE
LADLTGTLAARLDAIEGGSAGLARLEAAVAESAAAYTRAATVLSDQRAKAAARLDAAVADELAPLKLDAARFRTLVERLP
ADRWGPGGIDRVEFLIATNPGAPFAPLAKIASGGELSRFILALKVALAEEGGADTIIFDEIDRGVGGAVASAIGERLARL
AGAGKQLLAVTHSPQVAAKGAFHFVIAKSSEGTVTRTSVHTLDDAGRREEIARMLSGAEVTEEARAQAERLLEVAA

Sequences:

>Translated_556_residues
MLTALSIANIVLIERLDLDFEAGLGVLTGETGAGKSILLDALGLALGARADSALVRQGTDRAQVTASFAPPAAGSPLATL
LADNDITQGVGEPLIIRRTLKADGGSRAFLNDQPCSAALLREVGGHLVEIHGQHDDRGLLAPAGHRALLDAYARADTAAV
AAAHAAWRAAEAKLAAARAAIAEAERDREWLEHCVAELQALAPQPGEEAELAEARAAMQKGERLAGDLGAILEVFDGSDG
GPALLRGAARRLDRLAGDHALLAEALAALDRAIIEADEAETKLHEAARAMEYDPERLDATETRLFELRAMARKHACQPDE
LADLTGTLAARLDAIEGGSAGLARLEAAVAESAAAYTRAATVLSDQRAKAAARLDAAVADELAPLKLDAARFRTLVERLP
ADRWGPGGIDRVEFLIATNPGAPFAPLAKIASGGELSRFILALKVALAEEGGADTIIFDEIDRGVGGAVASAIGERLARL
AGAGKQLLAVTHSPQVAAKGAFHFVIAKSSEGTVTRTSVHTLDDAGRREEIARMLSGAEVTEEARAQAERLLEVAA
>Mature_556_residues
MLTALSIANIVLIERLDLDFEAGLGVLTGETGAGKSILLDALGLALGARADSALVRQGTDRAQVTASFAPPAAGSPLATL
LADNDITQGVGEPLIIRRTLKADGGSRAFLNDQPCSAALLREVGGHLVEIHGQHDDRGLLAPAGHRALLDAYARADTAAV
AAAHAAWRAAEAKLAAARAAIAEAERDREWLEHCVAELQALAPQPGEEAELAEARAAMQKGERLAGDLGAILEVFDGSDG
GPALLRGAARRLDRLAGDHALLAEALAALDRAIIEADEAETKLHEAARAMEYDPERLDATETRLFELRAMARKHACQPDE
LADLTGTLAARLDAIEGGSAGLARLEAAVAESAAAYTRAATVLSDQRAKAAARLDAAVADELAPLKLDAARFRTLVERLP
ADRWGPGGIDRVEFLIATNPGAPFAPLAKIASGGELSRFILALKVALAEEGGADTIIFDEIDRGVGGAVASAIGERLARL
AGAGKQLLAVTHSPQVAAKGAFHFVIAKSSEGTVTRTSVHTLDDAGRREEIARMLSGAEVTEEARAQAERLLEVAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=559, Percent_Identity=34.3470483005367, Blast_Score=301, Evalue=7e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 57852; Mature: 57852

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTALSIANIVLIERLDLDFEAGLGVLTGETGAGKSILLDALGLALGARADSALVRQGTD
CCCHHHHHHHHHHHHCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
RAQVTASFAPPAAGSPLATLLADNDITQGVGEPLIIRRTLKADGGSRAFLNDQPCSAALL
HHEEEEECCCCCCCCCHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
REVGGHLVEIHGQHDDRGLLAPAGHRALLDAYARADTAAVAAAHAAWRAAEAKLAAARAA
HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEAERDREWLEHCVAELQALAPQPGEEAELAEARAAMQKGERLAGDLGAILEVFDGSDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPALLRGAARRLDRLAGDHALLAEALAALDRAIIEADEAETKLHEAARAMEYDPERLDAT
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCHH
ETRLFELRAMARKHACQPDELADLTGTLAARLDAIEGGSAGLARLEAAVAESAAAYTRAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TVLSDQRAKAAARLDAAVADELAPLKLDAARFRTLVERLPADRWGPGGIDRVEFLIATNP
HHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
GAPFAPLAKIASGGELSRFILALKVALAEEGGADTIIFDEIDRGVGGAVASAIGERLARL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHH
AGAGKQLLAVTHSPQVAAKGAFHFVIAKSSEGTVTRTSVHTLDDAGRREEIARMLSGAEV
HCCCCEEEEEECCCCHHHCCCEEEEEEECCCCCEEEEEEHHHHCCCCHHHHHHHHCCCHH
TEEARAQAERLLEVAA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTALSIANIVLIERLDLDFEAGLGVLTGETGAGKSILLDALGLALGARADSALVRQGTD
CCCHHHHHHHHHHHHCCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
RAQVTASFAPPAAGSPLATLLADNDITQGVGEPLIIRRTLKADGGSRAFLNDQPCSAALL
HHEEEEECCCCCCCCCHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
REVGGHLVEIHGQHDDRGLLAPAGHRALLDAYARADTAAVAAAHAAWRAAEAKLAAARAA
HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEAERDREWLEHCVAELQALAPQPGEEAELAEARAAMQKGERLAGDLGAILEVFDGSDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPALLRGAARRLDRLAGDHALLAEALAALDRAIIEADEAETKLHEAARAMEYDPERLDAT
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCHH
ETRLFELRAMARKHACQPDELADLTGTLAARLDAIEGGSAGLARLEAAVAESAAAYTRAA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TVLSDQRAKAAARLDAAVADELAPLKLDAARFRTLVERLPADRWGPGGIDRVEFLIATNP
HHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
GAPFAPLAKIASGGELSRFILALKVALAEEGGADTIIFDEIDRGVGGAVASAIGERLARL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHH
AGAGKQLLAVTHSPQVAAKGAFHFVIAKSSEGTVTRTSVHTLDDAGRREEIARMLSGAEV
HCCCCEEEEEECCCCHHHCCCEEEEEEECCCCCEEEEEEHHHHCCCCHHHHHHHHCCCHH
TEEARAQAERLLEVAA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]