Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486022
Identifier: 103486022
GI number: 103486022
Start: 543974
End: 544321
Strand: Direct
Name: 103486022
Synonym: Sala_0529
Alternate gene names: NA
Gene position: 543974-544321 (Clockwise)
Preceding gene: 103486021
Following gene: 103486025
Centisome position: 16.26
GC content: 65.52
Gene sequence:
>348_bases ATGGGAACGGTCACCCCCCTGCCGTTCGCAGGCCGGACGGCGCCGCTTCAGACCGGTTTCGAACGCCCCGAACTTTTGCG CATCCTCGACCTTTACGGCCGCATGGTCGCCGCAGGGCATTGGCGCGACTATGCGATGGATTTCCACCGCGACGCCGCGA TCTTCTCCGCCTTTCGTCGCGCCGCAGAGCGCCCCGAATACCGCATCGAAAAACGCCCCGCGCTCCGGAACCGTCAGGGC ATGTGGGCCTTGGTCTCCGAAGCCGGGGCGATCCTGAAGCGCGGGGACGAGCTGTCCAATGTGCTCGCCCCCGTCGAGCG CAAACTTATGAAGCTGGTTGCGGACTGA
Upstream 100 bases:
>100_bases AACAGATGCAGAAACAGCTCGCGGCGCTGATCGCCCAGCGCGACGTGGCGGAAGCTGACGAAGAGGCGCCGCGGCGCAAG GGAGGGCGTAAGAGCGCCTG
Downstream 100 bases:
>100_bases CCGCGACCGGCAACTGATTGGCGATAGTCGTTGGCAGGATCCCCACGACCACCGCCCGCGCATTCTGCCAGAAGGCCGAC AGCAGCAGAAGCGCCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGTVTPLPFAGRTAPLQTGFERPELLRILDLYGRMVAAGHWRDYAMDFHRDAAIFSAFRRAAERPEYRIEKRPALRNRQG MWALVSEAGAILKRGDELSNVLAPVERKLMKLVAD
Sequences:
>Translated_115_residues MGTVTPLPFAGRTAPLQTGFERPELLRILDLYGRMVAAGHWRDYAMDFHRDAAIFSAFRRAAERPEYRIEKRPALRNRQG MWALVSEAGAILKRGDELSNVLAPVERKLMKLVAD >Mature_114_residues GTVTPLPFAGRTAPLQTGFERPELLRILDLYGRMVAAGHWRDYAMDFHRDAAIFSAFRRAAERPEYRIEKRPALRNRQGM WALVSEAGAILKRGDELSNVLAPVERKLMKLVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13067; Mature: 12936
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVTPLPFAGRTAPLQTGFERPELLRILDLYGRMVAAGHWRDYAMDFHRDAAIFSAFRR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAERPEYRIEKRPALRNRQGMWALVSEAGAILKRGDELSNVLAPVERKLMKLVAD HHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTVTPLPFAGRTAPLQTGFERPELLRILDLYGRMVAAGHWRDYAMDFHRDAAIFSAFRR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAERPEYRIEKRPALRNRQGMWALVSEAGAILKRGDELSNVLAPVERKLMKLVAD HHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA