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The map label for this gene is lysK [H]

Identifier: 103485956

GI number: 103485956

Start: 474351

End: 475952

Strand: Direct

Name: lysK [H]

Synonym: Sala_0463

Alternate gene names: 103485956

Gene position: 474351-475952 (Clockwise)

Preceding gene: 103485954

Following gene: 103485957

Centisome position: 14.18

GC content: 64.67

Gene sequence:

>1602_bases
ATGACCGACCTGCATCTTCATCCGTCGCTGCGCGAGGCTGCGCAAACGTCCAGGGCCTGGCCGTTCGAGGAAGCGCGCAA
GCTGGTCAAACGCTATCCCGAAGGCAAGCCGGGCGGCGCGCCTGTGCTGTTCGAGACCGGCTATGGCCCGTCGGGCTTGC
CGCATATCGGCACCTTCAACGAAGTGCTGCGCACGACGATGGTGCGGCGCGCCTATGAGACGCTGACCGGCGGCGCGCCG
ACGCGGCTCGTCGCGTTCAGCGACGATATGGACGGCCTGAGGAAGGTGCCCGACAATGTGCCGAACGGCGCCATGCTGCG
CGAGCATCTGGGGCGGCCGCTGACCGCGATCCCCGACCCGTTCGGCAAATATGAGAGCTTTGCGCATCACAATAATGCGA
TGCTGCGCGAGTTCCTCGACCGCTTCGGTTTCGATTACGAGTTCGTCAGCTCGACCGAACGCTACACATCGGGCGCGTTC
GACGAGGCGCTGAAGAATGTCCTGCGCCACAATCAGGACATACTCGACATCATGCTGCCGACGCTGCGCGCCGAGCGCGC
CGCGACCTATTCGCCGGTGCTGCCGGTGAGCCCGAAGTCGGGCATCGTGTTGCAGGTGCCGGTCACCGTCGTCGATGCCG
AGGCGGGCCTCGTGTCGTTCGAGGATGAAGGGGAGACGATCACCCATTCGATCCTGCGCGGCGGCGCCAAGCTCCAGTGG
AAGGTCGACTGGGCGATGCGCTGGGTCGCGCTGGGCGTCGATTATGAAATGTACGGCAAGGATCTGACCGACAGCGGCGT
CCAGTCGGGCAAGATCGCCAGGGCGCTCGGCGGGCGCAAGCCCGAGGGGCTGATCTATGAGATGTTCCTCGACGAAAAGG
GCGAGAAGATTTCGAAGTCGAAGGGCAATGGCCTGTCGATGGAGGAATGGCTGACCTATGGCAGCGAGGAAAGCCTGGCC
TTTTACGCCTATCGCGAGCCCAAGGCGGCGAAGCAGCTGCATATCGGCGTGGTGCCGAAAGCGGTCGACGAATATCTGCA
GATGCGCGGCACCTATCCGGCGCAGGAGCCCGACAAGAGGCTGGGCAACCCCGTGCATCATGTCCATGTCGCGCGCGGTC
AGGATGTGCCGGAGACGGTGTTGCCGGTGACATATGGCCTGCTGCTCAACCTCGTCGGGGTGATGGGCGCCGATGCGTCG
AAGGAGCAGATCTGGCGCTACCTCGGTCAATATGTCGCGGGAGCCGATGCGGCGACCTATCCCGAGCTCGACCGGTTGAT
CGACAATGCGATGGCGTATAACCGCGATTTCGTCGCGCCGACCTTGCAGCGCCGCAAGCCCGCGGGCGGCGAGGTCGCGG
CGCTGCGCGAGCTCGATGCGCGGCTCGCCGCGCTGCCCGCCGACGCCTCGGCCGACGACATCCAGAATATCGTCTATGAA
ATCGGCAAGGACGAGGCGCACGGCTTCGACAATCTGCGCGACTGGTTCAGGGCGCTGTACGAGACGCTGCTGGGATCGAG
TGCGGGTCCGCGTATGGGCAGCTTTATCGCGCTGTTCGGGGTGGAGAATACGCGGCGGCTGATCGCGGAAGCGCTGGCGT
GA

Upstream 100 bases:

>100_bases
ATGCTAAGCCCGGCATGGTAAATAATCCGGTAACGATGATCGCGCGCGACGAGGCAATTTTGCCTTTCGATTCGGTCGCG
CTTGCCGCTATGGGCGCGGC

Downstream 100 bases:

>100_bases
AAGGCGGCGTCATTGCGAGCGAAGCGAAGGAACGGAAAGCCGAGCGATGATCGACATTTTCACCACCGGCGGAACGATCG
ACAAGGTCTATTTCGACGCG

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFNEVLRTTMVRRAYETLTGGAP
TRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDPFGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAF
DEALKNVLRHNQDILDIMLPTLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKSKGNGLSMEEWLTYGSEESLA
FYAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKRLGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADAS
KEQIWRYLGQYVAGADAATYPELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYE
IGKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA

Sequences:

>Translated_533_residues
MTDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFNEVLRTTMVRRAYETLTGGAP
TRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDPFGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAF
DEALKNVLRHNQDILDIMLPTLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKSKGNGLSMEEWLTYGSEESLA
FYAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKRLGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADAS
KEQIWRYLGQYVAGADAATYPELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYE
IGKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA
>Mature_532_residues
TDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFNEVLRTTMVRRAYETLTGGAPT
RLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDPFGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAFD
EALKNVLRHNQDILDIMLPTLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQWK
VDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKSKGNGLSMEEWLTYGSEESLAF
YAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKRLGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADASK
EQIWRYLGQYVAGADAATYPELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYEI
GKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 58972; Mature: 58840

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHH
EVLRTTMVRRAYETLTGGAPTRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDP
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
FGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAFDEALKNVLRHNQDILDIMLP
CHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
TLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQW
HHHHHHCCCCCCCCCCCCCCCEEEEECEEEEECCCCEEEECCCCHHHHHHHHCCCCEEEE
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKS
EEHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHCC
KGNGLSMEEWLTYGSEESLAFYAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKR
CCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHH
LGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADASKEQIWRYLGQYVAGADAATY
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYE
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IGKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHC
>Mature Secondary Structure 
TDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFN
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHH
EVLRTTMVRRAYETLTGGAPTRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDP
HHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
FGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAFDEALKNVLRHNQDILDIMLP
CHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
TLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQW
HHHHHHCCCCCCCCCCCCCCCEEEEECEEEEECCCCEEEECCCCHHHHHHHHCCCCEEEE
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKS
EEHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHCC
KGNGLSMEEWLTYGSEESLAFYAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKR
CCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHH
LGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADASKEQIWRYLGQYVAGADAATY
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYE
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IGKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA