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The map label for this gene is istB [H]

Identifier: 103485911

GI number: 103485911

Start: 425953

End: 426720

Strand: Direct

Name: istB [H]

Synonym: Sala_0418

Alternate gene names: 103485911

Gene position: 425953-426720 (Clockwise)

Preceding gene: 103485910

Following gene: 103485914

Centisome position: 12.73

GC content: 60.94

Gene sequence:

>768_bases
ATGCGTCATGACCCCGCCAGCGCCGCGGTCGTCGTGATGCTGCGCGGCCTCAAGATGTATGGTATGGCTCAGGCCGTCGG
CGACATGATCGAGCAAGGCGCCCCTGCCTTCGAGGCGGCCGTGCCGGTACTGTCCCAGTTGCTCAAAGCTGAGATGGCCG
AGCGCGAGGTCCGCTCAATCGCCTATCAGATCAAGGCTGCCCGCTTCCCTGCCTACAAGGATCTGGCCGGCTTCGACTTC
GCCGCCAGCGAGATCAATGAGGCCTTGGTGCGTCAGCTCTACCGCGGTGACTTCATGGATAGCGCCGACAATGTGGTGCT
GATCGGCGGGCCCGGCACCGGCAAAAGCCACATCGCCACCGCCCTTGGCGTCCAAGCGGTCGAGCACCACCGTAGAAAAG
TTCGCTTCTTCGCCACCGTCGATCTGGTCAATGCGCTGGAACAGGAAAAGGCGGCTAACAAGGCAGGCCAACTGGCCGAG
CGGCTGCTCAAGCTCGACCTCATAATATTGGACGAGTTGGGATATCTCCCGTTCAGCCCGTCAGGCGGTGCCCTGCTGTT
CCATCTGCTCAGTAAGCTGTATGAACGCACCAGCGTGGTGATCACCACCAACCTGAGCTTCAGCGAGTGGGCCAGCATCT
TCGGCGATGCCAAGATGACGACCGCTTTACTGGATCGCCTGACCCACCATTGCCACATTCTCGAGACCGGCAATGACAGC
TTCCGCTTCAGGGCCAGTTCCACCGCGCCCAAATCCAGAAAGGGGTAA

Upstream 100 bases:

>100_bases
GCGCCACCGGCACCAACGATCGATGCCCCGCAGGCCCTGCGCCTTAGCACGGAGCCCAAAGCCGATGTAGGCCGCTACGA
CACGCTGAGGGAGCTGCGTC

Downstream 100 bases:

>100_bases
TGCCAACACTTGACGATGCCCGCTAAGGGCAACACTTAACCCATACCCACCCGGGTCAGTTCTCGATGAAAATCCCGGGT
CAGTTCTCAGCGCAAATCAA

Product: IstB-like ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRHDPASAAVVVMLRGLKMYGMAQAVGDMIEQGAPAFEAAVPVLSQLLKAEMAEREVRSIAYQIKAARFPAYKDLAGFDF
AASEINEALVRQLYRGDFMDSADNVVLIGGPGTGKSHIATALGVQAVEHHRRKVRFFATVDLVNALEQEKAANKAGQLAE
RLLKLDLIILDELGYLPFSPSGGALLFHLLSKLYERTSVVITTNLSFSEWASIFGDAKMTTALLDRLTHHCHILETGNDS
FRFRASSTAPKSRKG

Sequences:

>Translated_255_residues
MRHDPASAAVVVMLRGLKMYGMAQAVGDMIEQGAPAFEAAVPVLSQLLKAEMAEREVRSIAYQIKAARFPAYKDLAGFDF
AASEINEALVRQLYRGDFMDSADNVVLIGGPGTGKSHIATALGVQAVEHHRRKVRFFATVDLVNALEQEKAANKAGQLAE
RLLKLDLIILDELGYLPFSPSGGALLFHLLSKLYERTSVVITTNLSFSEWASIFGDAKMTTALLDRLTHHCHILETGNDS
FRFRASSTAPKSRKG
>Mature_255_residues
MRHDPASAAVVVMLRGLKMYGMAQAVGDMIEQGAPAFEAAVPVLSQLLKAEMAEREVRSIAYQIKAARFPAYKDLAGFDF
AASEINEALVRQLYRGDFMDSADNVVLIGGPGTGKSHIATALGVQAVEHHRRKVRFFATVDLVNALEQEKAANKAGQLAE
RLLKLDLIILDELGYLPFSPSGGALLFHLLSKLYERTSVVITTNLSFSEWASIFGDAKMTTALLDRLTHHCHILETGNDS
FRFRASSTAPKSRKG

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 27863; Mature: 27863

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDPASAAVVVMLRGLKMYGMAQAVGDMIEQGAPAFEAAVPVLSQLLKAEMAEREVRSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYQIKAARFPAYKDLAGFDFAASEINEALVRQLYRGDFMDSADNVVLIGGPGTGKSHIAT
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHH
ALGVQAVEHHRRKVRFFATVDLVNALEQEKAANKAGQLAERLLKLDLIILDELGYLPFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SGGALLFHLLSKLYERTSVVITTNLSFSEWASIFGDAKMTTALLDRLTHHCHILETGNDS
CCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
FRFRASSTAPKSRKG
EEEEECCCCCCCCCC
>Mature Secondary Structure
MRHDPASAAVVVMLRGLKMYGMAQAVGDMIEQGAPAFEAAVPVLSQLLKAEMAEREVRSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AYQIKAARFPAYKDLAGFDFAASEINEALVRQLYRGDFMDSADNVVLIGGPGTGKSHIAT
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHH
ALGVQAVEHHRRKVRFFATVDLVNALEQEKAANKAGQLAERLLKLDLIILDELGYLPFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SGGALLFHLLSKLYERTSVVITTNLSFSEWASIFGDAKMTTALLDRLTHHCHILETGNDS
CCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
FRFRASSTAPKSRKG
EEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]