Click here to switch to the map view.

The map label for this gene is nmoT [H]

Identifier: 103485910

GI number: 103485910

Start: 424434

End: 425963

Strand: Direct

Name: nmoT [H]

Synonym: Sala_0417

Alternate gene names: 103485910

Gene position: 424434-425963 (Clockwise)

Preceding gene: 103485909

Following gene: 103485911

Centisome position: 12.69

GC content: 59.67

Gene sequence:

>1530_bases
GTGATCGACATGGACCTACTCAGTGTGATCCGCCGGTGGCATTTCCGCCAAGGCATGGCCATTCGTGAGATCAAGCGGCG
GACCGGCTTATCACGCAACACGATCCGCAAATATCTGCGAGCAGACGCGGTAGAGCCGGTGTTTAAGGTTCCCGACCGGC
CGAGCAAGCTGGACCCGTTTTCCGAGAAGCTGACAGGTTGGCTGCGCGTGGAGTCGGGCAAATCGCGCAAACAGAAACGT
ACGGCCAAGCAGCTTTACGCTGATCTCGTCACTTTGGGCTATGACGGCTCGTATGCTCGCGTGGCGGCCTTTGCCCGCGA
TTGGAAGCGCGACCGCCAGTATGAGCAGCAAACCAGCGGACGCGGGACCTTCGTGCCGCTGGTTTTCCAGCCTGGCGAAG
CCTTCCAGTTCGATTGGAGCGAGGATTACGCCGTGCTGGGTGGCAAGCAGGTCAAGCTGCAGGTGGCCCATACCAAGCTA
TCACACAGCCGGGCCTACATCGTTCGGGCCTATCTGTTGCAGACGCATGAGATGCTGTTCGACGCCCTGACGCAGGCATT
CCGAGTGCTGGGCGGCATTCCCCAACGCGGGATCTTTGATAATATGAAGACGGCGGTCGACAAGATCGGCCGTGGTAAGG
CGCGCCAAGTCAACGCCCGGTTCGCCGCCCTGGCCAGCCATTATCTATTCGAAACAGACTTCTGCAATCCAGCATCGGGC
TGGGAAAAGGGACAGGTCGAGAAGAACGTTCAGGATGCCCGTCACCGTCTGTGGCAGCCCATGCCCAGCTTCCCAGATCT
TGCAGCTCTCAATGCCTGGCTTGAGGAACAATGTGTCGCGCAGTGGGCAGAAATCCAGCACGGCACATTACCTGGCACCA
TCGCCGATGTGCACGCCGAAGAGGTAATCAGCTTGATGCCCATGGGGAGGCCCTTCGATGGCTTCGTCGAGCAGACCAAG
CGCGTGTCGCCCACCTGCCTAATCGCCTTCGAGCGCAACCGTTACAGTGTGCCAGCCTCCTTTGCCAATCGGCCCGTCAG
CCTGAGAGTTTACCCCGAGCGGCTTGTCATCGTCGCGGAAGGACAAGTCTTGTGCGAACACGAGCGGATCATTGACCGGT
CCCATCAGAAGCCGGGACGCACGATCTATGACTGGCGCCACTATCTGGCTGTCGTTCAGCGCAAGCCCGGCGCCCTGCGC
AATGGTGCGCCATTCCTTGAGATGCCCGAGGCATTCCGCCAGTTGCAGACCCAACTGCTCAAGCGGCTCGGCGGTGACAA
GGAGATGGTTGAGATCCTATCTCTTGTTTTGCACCATGATGAGCAGTCCGTTTTATGCGCAGTCGAGTTGGCTCTTGAGG
ACGGTGTGCCAACTAAAACTCATGTGCTCAACGTGCTGCACCGCCTGATTGACGGCAAGGCGCCACCGGCACCAACGATC
GATGCCCCGCAGGCCCTGCGCCTTAGCACGGAGCCCAAAGCCGATGTAGGCCGCTACGACACGCTGAGGGAGCTGCGTCA
TGCGTCATGA

Upstream 100 bases:

>100_bases
GTTGATTTGCGCTGAGAACTGACCCGGGAGGGGCAGAAATTTTCACTGAGAATTGACCCATGTTTTCCTCGCCCCCGGCA
GGCAGTCGGGAGGCATCGGA

Downstream 100 bases:

>100_bases
CCCCGCCAGCGCCGCGGTCGTCGTGATGCTGCGCGGCCTCAAGATGTATGGTATGGCTCAGGCCGTCGGCGACATGATCG
AGCAAGGCGCCCCTGCCTTC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPFSEKLTGWLRVESGKSRKQKR
TAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSGRGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKL
SHSRAYIVRAYLLQTHEMLFDALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAEEVISLMPMGRPFDGFVEQTK
RVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAEGQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALR
NGAPFLEMPEAFRQLQTQLLKRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
DAPQALRLSTEPKADVGRYDTLRELRHAS

Sequences:

>Translated_509_residues
MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPFSEKLTGWLRVESGKSRKQKR
TAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSGRGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKL
SHSRAYIVRAYLLQTHEMLFDALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAEEVISLMPMGRPFDGFVEQTK
RVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAEGQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALR
NGAPFLEMPEAFRQLQTQLLKRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
DAPQALRLSTEPKADVGRYDTLRELRHAS
>Mature_509_residues
MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPFSEKLTGWLRVESGKSRKQKR
TAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSGRGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKL
SHSRAYIVRAYLLQTHEMLFDALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAEEVISLMPMGRPFDGFVEQTK
RVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAEGQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALR
NGAPFLEMPEAFRQLQTQLLKRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
DAPQALRLSTEPKADVGRYDTLRELRHAS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57991; Mature: 57991

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPF
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCH
SEKLTGWLRVESGKSRKQKRTAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSG
HHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKLSHSRAYIVRAYLLQTHEMLF
CCCEEEEEECCCCCEECCCCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
DALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAE
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EVISLMPMGRPFDGFVEQTKRVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAE
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCEEEEEECCEEEEEEC
GQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALRNGAPFLEMPEAFRQLQTQLL
CCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
KRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
HHHCCCHHHHHHHHHHHHCCCCHHHHHEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DAPQALRLSTEPKADVGRYDTLRELRHAS
CCCCCEEECCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPF
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCH
SEKLTGWLRVESGKSRKQKRTAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSG
HHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKLSHSRAYIVRAYLLQTHEMLF
CCCEEEEEECCCCCEECCCCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
DALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAE
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EVISLMPMGRPFDGFVEQTKRVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAE
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCEEEEEECCEEEEEEC
GQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALRNGAPFLEMPEAFRQLQTQLL
CCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
KRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI
HHHCCCHHHHHHHHHHHHCCCCHHHHHEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
DAPQALRLSTEPKADVGRYDTLRELRHAS
CCCCCEEECCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]