The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103485872

Identifier: 103485872

GI number: 103485872

Start: 388838

End: 389599

Strand: Direct

Name: 103485872

Synonym: Sala_0377

Alternate gene names: NA

Gene position: 388838-389599 (Clockwise)

Preceding gene: 103485871

Following gene: 103485873

Centisome position: 11.62

GC content: 69.16

Gene sequence:

>762_bases
ATGCCGCTCGGGGGGGTTCAGCAATGGATCGAGGCCGAGCGTGCGCGTCCGCCCGCGCCGACGCGCGCCTGGTACTGGAC
GCTGGCGCTCGGCATCGCGGTGCTGGTGTTCGGGGCGTGGCTGACGCAGATTTTCCCGCAGCAGGGCCATGCGATCGCGC
CGGGCTATGGGGCGCCGGTGCTCGCCTTGGAGTTCGCCGGCGGGCAGGACGATCTCGAGGCGATTTTCGGGGTCGAAAGC
GATCCGCAGCAGGTCGCGCGCCTCGCGGCGATGCGCACGGGGAACGAGCGCGACTATCTTTACATGTTGCTTTACGCGGG
CTTCCTTGCCTGCGGCTGTTTTGCGCTGTGGCGCGAGCTTCGCGCGCGCGCTTTGCTGGCCGCGACGATGCTTCCCGCAG
CTGCGGCGCTCTGCGATGCCTATGAAAACTGGCTGCTTTTCGATATCCAGGCGGCCTTTACCGCGGGCGATTATTCGCCC
GCGATGGCCAGCCTGCCCTATCCGGTCGCGGCGAAGTTCCTGCTGCTCGCGCTGACCAATGTCGTCATCGGCGCCGCGGC
GACGCAGTTCGGGCGCTGGTGGGCGCTGTTCGGGACGCTCGCGATCCTGGCCGCGATCCCGACGGTAATGGCGATCATCA
CTCCCGCCGCCTTTGCGTGGATGCTGATCCCGTCGGCGGCGGGCGGATGGCTGTTGTTGCTCGCGCTCGCGGCGGCGGGA
AGCTGGCGGGCGATCGCGCGCGGGCAGCCGCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
GAAAAGACGGGTTTCGCCGCCGAACGCCCGGTGATCGAAGTGCGCGGTAAATGCGCCGAGTGCCAATAGGGTGAAGCGCG
CCGTGTCGCCGGACGGTTGA

Downstream 100 bases:

>100_bases
CGGTCGTGCTCGCAATCCGGTGCGACATCGCCTATATCGGTGATCATGTATGATTATGTCACCATAACCGCCGACGATGC
GACCGCCCCGGCGCGCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPLGGVQQWIEAERARPPAPTRAWYWTLALGIAVLVFGAWLTQIFPQQGHAIAPGYGAPVLALEFAGGQDDLEAIFGVES
DPQQVARLAAMRTGNERDYLYMLLYAGFLACGCFALWRELRARALLAATMLPAAAALCDAYENWLLFDIQAAFTAGDYSP
AMASLPYPVAAKFLLLALTNVVIGAAATQFGRWWALFGTLAILAAIPTVMAIITPAAFAWMLIPSAAGGWLLLLALAAAG
SWRAIARGQPLAG

Sequences:

>Translated_253_residues
MPLGGVQQWIEAERARPPAPTRAWYWTLALGIAVLVFGAWLTQIFPQQGHAIAPGYGAPVLALEFAGGQDDLEAIFGVES
DPQQVARLAAMRTGNERDYLYMLLYAGFLACGCFALWRELRARALLAATMLPAAAALCDAYENWLLFDIQAAFTAGDYSP
AMASLPYPVAAKFLLLALTNVVIGAAATQFGRWWALFGTLAILAAIPTVMAIITPAAFAWMLIPSAAGGWLLLLALAAAG
SWRAIARGQPLAG
>Mature_252_residues
PLGGVQQWIEAERARPPAPTRAWYWTLALGIAVLVFGAWLTQIFPQQGHAIAPGYGAPVLALEFAGGQDDLEAIFGVESD
PQQVARLAAMRTGNERDYLYMLLYAGFLACGCFALWRELRARALLAATMLPAAAALCDAYENWLLFDIQAAFTAGDYSPA
MASLPYPVAAKFLLLALTNVVIGAAATQFGRWWALFGTLAILAAIPTVMAIITPAAFAWMLIPSAAGGWLLLLALAAAGS
WRAIARGQPLAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26969; Mature: 26838

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGGVQQWIEAERARPPAPTRAWYWTLALGIAVLVFGAWLTQIFPQQGHAIAPGYGAPV
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE
LALEFAGGQDDLEAIFGVESDPQQVARLAAMRTGNERDYLYMLLYAGFLACGCFALWREL
EEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RARALLAATMLPAAAALCDAYENWLLFDIQAAFTAGDYSPAMASLPYPVAAKFLLLALTN
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHH
VVIGAAATQFGRWWALFGTLAILAAIPTVMAIITPAAFAWMLIPSAAGGWLLLLALAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
SWRAIARGQPLAG
CCHHHHCCCCCCC
>Mature Secondary Structure 
PLGGVQQWIEAERARPPAPTRAWYWTLALGIAVLVFGAWLTQIFPQQGHAIAPGYGAPV
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE
LALEFAGGQDDLEAIFGVESDPQQVARLAAMRTGNERDYLYMLLYAGFLACGCFALWREL
EEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RARALLAATMLPAAAALCDAYENWLLFDIQAAFTAGDYSPAMASLPYPVAAKFLLLALTN
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHH
VVIGAAATQFGRWWALFGTLAILAAIPTVMAIITPAAFAWMLIPSAAGGWLLLLALAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
SWRAIARGQPLAG
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA