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The map label for this gene is xcpS [H]

Identifier: 103485812

GI number: 103485812

Start: 325819

End: 327036

Strand: Direct

Name: xcpS [H]

Synonym: Sala_0317

Alternate gene names: 103485812

Gene position: 325819-327036 (Clockwise)

Preceding gene: 103485811

Following gene: 103485813

Centisome position: 9.74

GC content: 67.9

Gene sequence:

>1218_bases
ATGCCTGATTATCGCTATGTGGCGATCGATCCCGCAGGCCGCGAGCGCAAGGGGCGGTTGACCGCCGCGAACGACGATGC
CGCGCGCGCCGACCTGATCCGCCGCAAGTTCCACATCGTCGTGGTCGAGGAGGCGGGGACGAAGGCCGGATCGGGACGTT
CGCTGCTCGCCTTTCGCAAGGACCGGCTTGGCCGCAAGGAACTGGCGCTTTTCACGCGCCAGCTCGCGACGCTCGCCGAG
GTCGCGCCGCTCGAAGAGGCGCTGCGCACGCTGACGCGCCAGAGCGAGGCCGAAAGCGCGCGCGGGGTGATTGCCGACGT
TCATGCCGGGCTGCTTGAGGGGCGCCGCCTTGCCGACGCGATGGCGCGCCAGCCGACGAGTTTTCCGCCGCTCTACCGTG
CGATGGTCGCGGCGGGCGAAACCACGGGCAGCCTGACGGTGATCCTCGCACGACTCGCCGACCTGCTCGAACGCCAGGCC
GAAGTGCGCGGCAAGCTGATCGCCGCGCTCGCTTATCCCATCGTGCTCGCGGTCGTCGCGATCGGCGTCGTCGCGGCGCT
GATGATTTTTGTCGTCCCGCGCGTCGTCGAACAATTTACCGACACCGGCCAGCGATTGCCCTTTCTGACCCGCGCGGTGA
TCGGCGTGTCCAGCTTTGCCGCGAACTGGTGGTGGCTCATCGCGCTGCTGATGGTCGCTGCGGCCTTCGGCTGGGCGGCG
GCGATACGCCGCCCGGCCTTCAAGGCGCGCGTCGATGCGCGGCTGCTCCGCCTGCCGCTGCTCGGCCGCCTGCTCCGTGA
TCTTTATGCCGCGCGGTTCGCGCGCACCCTCGCGACGATGGTGTCGAGCCGCCTGCCGCTCGTCGAGGGGTTGCGGCTGA
CCTTGCCGACGATCCGCAATGCGGCGCTGGCGAGCGCCACCGCGGGACTTGTCGATCAGGTGCGCGCCGGGGGCAGCCTG
TCGGCGGCGCTGCGCGATGCGGGGGTTTTCCCGCCGCTGCTCGTCTATATGACCGCGAGCGGCGAAAGCGCCGGGCGGCT
GGAAGTAATGCTCGAACGCGCGGCCGATTATCTGGAGCGCGAGTTCGACCGCTTCACCGCCGCGTCGATGGCGCTTCTCG
AACCTGTCATAATTGTCGTTATGGGGTCATGTGTTGCCCTTATCATCCTCGCCATTCTGCTGCCGATCCTTCAGTTGCAG
AATCTAGCCGGACTGTAA

Upstream 100 bases:

>100_bases
CTGAAATCGCCGACGCTGGCGTCCGCAGCGCGGACGATGGTCGCGAAGGGACTGACGACCGCCGAGGAAGCGATCCGCGT
CGCGCGGCGCGAGGATGTCG

Downstream 100 bases:

>100_bases
TAAATGTCGCTGATGCAGCTTTTTCTCCGCCTGATGCTCGATACCGGACGTCCGCCGGTTCATCGTCGCCGTAAAAAGGG
CGAGCGCGGCTTTACGCTGA

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPDYRYVAIDPAGRERKGRLTAANDDAARADLIRRKFHIVVVEEAGTKAGSGRSLLAFRKDRLGRKELALFTRQLATLAE
VAPLEEALRTLTRQSEAESARGVIADVHAGLLEGRRLADAMARQPTSFPPLYRAMVAAGETTGSLTVILARLADLLERQA
EVRGKLIAALAYPIVLAVVAIGVVAALMIFVVPRVVEQFTDTGQRLPFLTRAVIGVSSFAANWWWLIALLMVAAAFGWAA
AIRRPAFKARVDARLLRLPLLGRLLRDLYAARFARTLATMVSSRLPLVEGLRLTLPTIRNAALASATAGLVDQVRAGGSL
SAALRDAGVFPPLLVYMTASGESAGRLEVMLERAADYLEREFDRFTAASMALLEPVIIVVMGSCVALIILAILLPILQLQ
NLAGL

Sequences:

>Translated_405_residues
MPDYRYVAIDPAGRERKGRLTAANDDAARADLIRRKFHIVVVEEAGTKAGSGRSLLAFRKDRLGRKELALFTRQLATLAE
VAPLEEALRTLTRQSEAESARGVIADVHAGLLEGRRLADAMARQPTSFPPLYRAMVAAGETTGSLTVILARLADLLERQA
EVRGKLIAALAYPIVLAVVAIGVVAALMIFVVPRVVEQFTDTGQRLPFLTRAVIGVSSFAANWWWLIALLMVAAAFGWAA
AIRRPAFKARVDARLLRLPLLGRLLRDLYAARFARTLATMVSSRLPLVEGLRLTLPTIRNAALASATAGLVDQVRAGGSL
SAALRDAGVFPPLLVYMTASGESAGRLEVMLERAADYLEREFDRFTAASMALLEPVIIVVMGSCVALIILAILLPILQLQ
NLAGL
>Mature_404_residues
PDYRYVAIDPAGRERKGRLTAANDDAARADLIRRKFHIVVVEEAGTKAGSGRSLLAFRKDRLGRKELALFTRQLATLAEV
APLEEALRTLTRQSEAESARGVIADVHAGLLEGRRLADAMARQPTSFPPLYRAMVAAGETTGSLTVILARLADLLERQAE
VRGKLIAALAYPIVLAVVAIGVVAALMIFVVPRVVEQFTDTGQRLPFLTRAVIGVSSFAANWWWLIALLMVAAAFGWAAA
IRRPAFKARVDARLLRLPLLGRLLRDLYAARFARTLATMVSSRLPLVEGLRLTLPTIRNAALASATAGLVDQVRAGGSLS
AALRDAGVFPPLLVYMTASGESAGRLEVMLERAADYLEREFDRFTAASMALLEPVIIVVMGSCVALIILAILLPILQLQN
LAGL

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=402, Percent_Identity=36.0696517412935, Blast_Score=244, Evalue=5e-66,
Organism=Escherichia coli, GI1786295, Length=328, Percent_Identity=28.3536585365854, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43764; Mature: 43633

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYRYVAIDPAGRERKGRLTAANDDAARADLIRRKFHIVVVEEAGTKAGSGRSLLAFRK
CCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHH
DRLGRKELALFTRQLATLAEVAPLEEALRTLTRQSEAESARGVIADVHAGLLEGRRLADA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MARQPTSFPPLYRAMVAAGETTGSLTVILARLADLLERQAEVRGKLIAALAYPIVLAVVA
HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVVAALMIFVVPRVVEQFTDTGQRLPFLTRAVIGVSSFAANWWWLIALLMVAAAFGWAA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRRPAFKARVDARLLRLPLLGRLLRDLYAARFARTLATMVSSRLPLVEGLRLTLPTIRN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHH
AALASATAGLVDQVRAGGSLSAALRDAGVFPPLLVYMTASGESAGRLEVMLERAADYLER
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
EFDRFTAASMALLEPVIIVVMGSCVALIILAILLPILQLQNLAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDYRYVAIDPAGRERKGRLTAANDDAARADLIRRKFHIVVVEEAGTKAGSGRSLLAFRK
CCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHH
DRLGRKELALFTRQLATLAEVAPLEEALRTLTRQSEAESARGVIADVHAGLLEGRRLADA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MARQPTSFPPLYRAMVAAGETTGSLTVILARLADLLERQAEVRGKLIAALAYPIVLAVVA
HHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVVAALMIFVVPRVVEQFTDTGQRLPFLTRAVIGVSSFAANWWWLIALLMVAAAFGWAA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRRPAFKARVDARLLRLPLLGRLLRDLYAARFARTLATMVSSRLPLVEGLRLTLPTIRN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHH
AALASATAGLVDQVRAGGSLSAALRDAGVFPPLLVYMTASGESAGRLEVMLERAADYLER
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
EFDRFTAASMALLEPVIIVVMGSCVALIILAILLPILQLQNLAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]