Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is xcpT [H]

Identifier: 103485813

GI number: 103485813

Start: 327040

End: 327531

Strand: Direct

Name: xcpT [H]

Synonym: Sala_0318

Alternate gene names: 103485813

Gene position: 327040-327531 (Clockwise)

Preceding gene: 103485812

Following gene: 103485814

Centisome position: 9.78

GC content: 63.62

Gene sequence:

>492_bases
ATGTCGCTGATGCAGCTTTTTCTCCGCCTGATGCTCGATACCGGACGTCCGCCGGTTCATCGTCGCCGTAAAAAGGGCGA
GCGCGGCTTTACGCTGACCGAGTTGATGGTCGTCATCTTCATCATCGGCCTGCTCGCGACGGTGGTGATGATCAACGTCC
TGCCCAGCCAGGACCGCGCGATGGTGACCAAGGCGAAGGCCGATATTGCGACGCTCGAAACCGCGCTCGAACAATATCGG
CTCGACAATCTGACCTATCCGACGTCGACCGACGGGCTGAATGCGCTTGTCACCGCGCCGCCCGCGCTCGCGCAGCCCGA
ACGCTATCGCCGCGGCGGCTATATCAGGAAGCTGCCCGAAGACCCGTGGGGCCGCCCCTATAATTATCAGGCGCCCGGCC
CGAACGGCAAGGCGTTCGACGTCTGGTCGCTTGGCGCCGACGGCGCCCCCGGCGGGACCGACGAAAATGCGGATATTCGC
GGCGACAGCTAA

Upstream 100 bases:

>100_bases
ACCTGTCATAATTGTCGTTATGGGGTCATGTGTTGCCCTTATCATCCTCGCCATTCTGCTGCCGATCCTTCAGTTGCAGA
ATCTAGCCGGACTGTAATAA

Downstream 100 bases:

>100_bases
ACTCCGCGCGCGCGCGCGTCCCGACGCCAACGGATTCACGCTGGTCGAACTGATGGTCGTGCTGGCGATTATGGCGCTCG
CGGCGACCGCGGTGGTGCTG

Product: general secretion pathway protein G

Products: NA

Alternate protein names: PilD-dependent protein pddA [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSLMQLFLRLMLDTGRPPVHRRRKKGERGFTLTELMVVIFIIGLLATVVMINVLPSQDRAMVTKAKADIATLETALEQYR
LDNLTYPTSTDGLNALVTAPPALAQPERYRRGGYIRKLPEDPWGRPYNYQAPGPNGKAFDVWSLGADGAPGGTDENADIR
GDS

Sequences:

>Translated_163_residues
MSLMQLFLRLMLDTGRPPVHRRRKKGERGFTLTELMVVIFIIGLLATVVMINVLPSQDRAMVTKAKADIATLETALEQYR
LDNLTYPTSTDGLNALVTAPPALAQPERYRRGGYIRKLPEDPWGRPYNYQAPGPNGKAFDVWSLGADGAPGGTDENADIR
GDS
>Mature_162_residues
SLMQLFLRLMLDTGRPPVHRRRKKGERGFTLTELMVVIFIIGLLATVVMINVLPSQDRAMVTKAKADIATLETALEQYRL
DNLTYPTSTDGLNALVTAPPALAQPERYRRGGYIRKLPEDPWGRPYNYQAPGPNGKAFDVWSLGADGAPGGTDENADIRG
DS

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP G family [H]

Homologues:

Organism=Escherichia coli, GI1789725, Length=134, Percent_Identity=46.2686567164179, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR013545
- InterPro:   IPR010054 [H]

Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 18001; Mature: 17870

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMQLFLRLMLDTGRPPVHRRRKKGERGFTLTELMVVIFIIGLLATVVMINVLPSQDRA
CHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MVTKAKADIATLETALEQYRLDNLTYPTSTDGLNALVTAPPALAQPERYRRGGYIRKLPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCC
DPWGRPYNYQAPGPNGKAFDVWSLGADGAPGGTDENADIRGDS
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLMQLFLRLMLDTGRPPVHRRRKKGERGFTLTELMVVIFIIGLLATVVMINVLPSQDRA
HHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MVTKAKADIATLETALEQYRLDNLTYPTSTDGLNALVTAPPALAQPERYRRGGYIRKLPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCC
DPWGRPYNYQAPGPNGKAFDVWSLGADGAPGGTDENADIRGDS
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]