The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485774

Identifier: 103485774

GI number: 103485774

Start: 276172

End: 277917

Strand: Direct

Name: 103485774

Synonym: Sala_0279

Alternate gene names: NA

Gene position: 276172-277917 (Clockwise)

Preceding gene: 103485773

Following gene: 103485775

Centisome position: 8.26

GC content: 70.56

Gene sequence:

>1746_bases
ATGGACCAGGCGAAAACGAACGAAATGGACCCCGACGAGGTCGACCGGATCATCGCCGATGAGCTTCAGCGCCTGCTCGA
ATCGCCCATGTTCACGCGCTCGCCGGTGTTGTCGCGGTTGCTGCAATTCCTTGTCGAACACCGGCTGCGCGGCGGGCGCA
GCGCGCCCAAGGCCTATGCGATCGCGACCGAGGCGCTGGGGCGGAGCGAGGATTTCGACCCCGCGGTCGACAGCTATCCG
CGCGTGATGGTCGGCCGGCTGCGGACGCTGCTCGACCGCTATTATTCCGAAACCGCGTGGGTCCACCGGCTGCGCGTGCC
GCAGGGCAGCTACGAGGTGGTCGTCCAGCATCGCTCGTCACCTCCCGCCGCGCGCGCGGCCGAGGGACCGGACGGCGACG
ATGACGTCAAGGCCGCAGCCGCAGCGGCTGGCGGCGATGCGGTGCCGCCGGCGGTCGCCAGGCCGGGCGGCGGCCGGTTC
GGCCGGTGGATCGTCGCCCTGCTGCTTCTGGCGCTCGCGTTGCTCGCGCTCTGGGCGCTGCGCGGCGAAGCGCCGCGCCT
GCTCGCGCGCGATGCCGTTCCCGAACCCTTGCTCGAGATCAGCGCCCCGGATTCAGGCAATCTGCCTGAATCGCGCGCGC
TCGCGCGCGCGCTCGACGGCAGACTGCGCGACGGGCTGCGGCGCTTTGACCTGATCGAACTGCTCGCCGCGCACACGGCG
GGCGGCGCAGCTCCACGCCCTGCCGACTACCGGCTCGACACCTCGCTCGTCCGCACGGTCGACGGGGTCGTCGACGTGAC
GCTGGTGCTCAACCGCGTCGCCGACCAGCGCGCGATCTGGTCGCAGCAATTGCGGCTGGACCATTTCGACACGCCGGAGT
TCACCGCTGTCGAGCCCGTCATCGCGCAGCTTGCGGGCGATTATGGCGTGATCGTGCGCGACCAGATCCGGCGCCAGCCC
GATAATTATGCGCCGGGCTATCCCTGCCTCGCGCAGTTCAACCGGTTGCGCCAGATGCGCGACGCGGCCACGGCCAAGCG
GGTCGTCAGCTGTCTGCGCGCGATGATCAAGGCCGACCCGCGCGATCCGGTCGCGCTTGCCGCGCTGTCGCTCGTGCGGT
TCGGCGACTGGCAGCCGCAGCGCGGGACGCCCGCAGGCCGCGAAGCCTTTGCCGAGGCGCGCGCGCTGGCGCTGCGTGCC
TATCGCGAAGATCCCGATTCCTCGGTCGGGCAGTTCGCGATGGCGCGCGCGAACTTTTACGCGGGCGACTGTGCGGCGGG
CATTGCGATGGGCGACAGCGCGCGAGCGCTCAACCCCTATGATGCCGACATGGCCGGCTTCCTCGGTCTGTTCAAGCTGG
CGTGCGACCATGCGGATGAGGGCGAGGAACTGCTGCGCCGTTCGCTGGCGCTCGACCCTTCCAATCCCGGCGTGCCTGCG
GTGACGCTGGCTTTCATCCTGTCGCAGCGCGGCGAACAGGCGCAGGCGCAGGCGATCCTCGATCGAATGCCGTCGCCGAC
CAACCTCGAGCCGCAATATCTGATGGTGCGGTCGGTCGTGCTGGCGCGACAGGGCGAGGTCGACGCGGCGCGCGCATTGT
GGCGCCGCCTGCTCGCCTATACGCGCCAGCCCGCCGATGCGCCGCCCGAACAGGTGCTCGGCCGTTTCCTGATCACTCCG
GCGGTGATCGCGCGTGCGTCGGCGGCGCTGCGCGAATCCGGCGTCGTCGGCCCTCCGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTGGCCGGCTTGTTACCGTTACGAAGGCGTTACAATGGGTGGGCGCGCCGGACGATTGGCGTATCTACCGTATCGCCCGC
CGCGGGCATTTGAGGGTAGC

Downstream 100 bases:

>100_bases
ACCGCCGCGCGCCGATTATTCGCGGTGCCCGGTCTTGCGCGCCGGGGCGGCGGCGCCTATTTTTGCGACGGGCGCCAGAG
GGGCAGAAAGGGGCGCGCCC

Product: tetratricopeptide TPR_4

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MDQAKTNEMDPDEVDRIIADELQRLLESPMFTRSPVLSRLLQFLVEHRLRGGRSAPKAYAIATEALGRSEDFDPAVDSYP
RVMVGRLRTLLDRYYSETAWVHRLRVPQGSYEVVVQHRSSPPAARAAEGPDGDDDVKAAAAAAGGDAVPPAVARPGGGRF
GRWIVALLLLALALLALWALRGEAPRLLARDAVPEPLLEISAPDSGNLPESRALARALDGRLRDGLRRFDLIELLAAHTA
GGAAPRPADYRLDTSLVRTVDGVVDVTLVLNRVADQRAIWSQQLRLDHFDTPEFTAVEPVIAQLAGDYGVIVRDQIRRQP
DNYAPGYPCLAQFNRLRQMRDAATAKRVVSCLRAMIKADPRDPVALAALSLVRFGDWQPQRGTPAGREAFAEARALALRA
YREDPDSSVGQFAMARANFYAGDCAAGIAMGDSARALNPYDADMAGFLGLFKLACDHADEGEELLRRSLALDPSNPGVPA
VTLAFILSQRGEQAQAQAILDRMPSPTNLEPQYLMVRSVVLARQGEVDAARALWRRLLAYTRQPADAPPEQVLGRFLITP
AVIARASAALRESGVVGPPAG

Sequences:

>Translated_581_residues
MDQAKTNEMDPDEVDRIIADELQRLLESPMFTRSPVLSRLLQFLVEHRLRGGRSAPKAYAIATEALGRSEDFDPAVDSYP
RVMVGRLRTLLDRYYSETAWVHRLRVPQGSYEVVVQHRSSPPAARAAEGPDGDDDVKAAAAAAGGDAVPPAVARPGGGRF
GRWIVALLLLALALLALWALRGEAPRLLARDAVPEPLLEISAPDSGNLPESRALARALDGRLRDGLRRFDLIELLAAHTA
GGAAPRPADYRLDTSLVRTVDGVVDVTLVLNRVADQRAIWSQQLRLDHFDTPEFTAVEPVIAQLAGDYGVIVRDQIRRQP
DNYAPGYPCLAQFNRLRQMRDAATAKRVVSCLRAMIKADPRDPVALAALSLVRFGDWQPQRGTPAGREAFAEARALALRA
YREDPDSSVGQFAMARANFYAGDCAAGIAMGDSARALNPYDADMAGFLGLFKLACDHADEGEELLRRSLALDPSNPGVPA
VTLAFILSQRGEQAQAQAILDRMPSPTNLEPQYLMVRSVVLARQGEVDAARALWRRLLAYTRQPADAPPEQVLGRFLITP
AVIARASAALRESGVVGPPAG
>Mature_581_residues
MDQAKTNEMDPDEVDRIIADELQRLLESPMFTRSPVLSRLLQFLVEHRLRGGRSAPKAYAIATEALGRSEDFDPAVDSYP
RVMVGRLRTLLDRYYSETAWVHRLRVPQGSYEVVVQHRSSPPAARAAEGPDGDDDVKAAAAAAGGDAVPPAVARPGGGRF
GRWIVALLLLALALLALWALRGEAPRLLARDAVPEPLLEISAPDSGNLPESRALARALDGRLRDGLRRFDLIELLAAHTA
GGAAPRPADYRLDTSLVRTVDGVVDVTLVLNRVADQRAIWSQQLRLDHFDTPEFTAVEPVIAQLAGDYGVIVRDQIRRQP
DNYAPGYPCLAQFNRLRQMRDAATAKRVVSCLRAMIKADPRDPVALAALSLVRFGDWQPQRGTPAGREAFAEARALALRA
YREDPDSSVGQFAMARANFYAGDCAAGIAMGDSARALNPYDADMAGFLGLFKLACDHADEGEELLRRSLALDPSNPGVPA
VTLAFILSQRGEQAQAQAILDRMPSPTNLEPQYLMVRSVVLARQGEVDAARALWRRLLAYTRQPADAPPEQVLGRFLITP
AVIARASAALRESGVVGPPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63107; Mature: 63107

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAKTNEMDPDEVDRIIADELQRLLESPMFTRSPVLSRLLQFLVEHRLRGGRSAPKAYA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
IATEALGRSEDFDPAVDSYPRVMVGRLRTLLDRYYSETAWVHRLRVPQGSYEVVVQHRSS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
PPAARAAEGPDGDDDVKAAAAAAGGDAVPPAVARPGGGRFGRWIVALLLLALALLALWAL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGEAPRLLARDAVPEPLLEISAPDSGNLPESRALARALDGRLRDGLRRFDLIELLAAHTA
CCCCCHHHHHHCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGAAPRPADYRLDTSLVRTVDGVVDVTLVLNRVADQRAIWSQQLRLDHFDTPEFTAVEPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
IAQLAGDYGVIVRDQIRRQPDNYAPGYPCLAQFNRLRQMRDAATAKRVVSCLRAMIKADP
HHHHCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDPVALAALSLVRFGDWQPQRGTPAGREAFAEARALALRAYREDPDSSVGQFAMARANFY
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
AGDCAAGIAMGDSARALNPYDADMAGFLGLFKLACDHADEGEELLRRSLALDPSNPGVPA
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHH
VTLAFILSQRGEQAQAQAILDRMPSPTNLEPQYLMVRSVVLARQGEVDAARALWRRLLAY
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TRQPADAPPEQVLGRFLITPAVIARASAALRESGVVGPPAG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDQAKTNEMDPDEVDRIIADELQRLLESPMFTRSPVLSRLLQFLVEHRLRGGRSAPKAYA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
IATEALGRSEDFDPAVDSYPRVMVGRLRTLLDRYYSETAWVHRLRVPQGSYEVVVQHRSS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
PPAARAAEGPDGDDDVKAAAAAAGGDAVPPAVARPGGGRFGRWIVALLLLALALLALWAL
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGEAPRLLARDAVPEPLLEISAPDSGNLPESRALARALDGRLRDGLRRFDLIELLAAHTA
CCCCCHHHHHHCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGAAPRPADYRLDTSLVRTVDGVVDVTLVLNRVADQRAIWSQQLRLDHFDTPEFTAVEPV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
IAQLAGDYGVIVRDQIRRQPDNYAPGYPCLAQFNRLRQMRDAATAKRVVSCLRAMIKADP
HHHHCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDPVALAALSLVRFGDWQPQRGTPAGREAFAEARALALRAYREDPDSSVGQFAMARANFY
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
AGDCAAGIAMGDSARALNPYDADMAGFLGLFKLACDHADEGEELLRRSLALDPSNPGVPA
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHH
VTLAFILSQRGEQAQAQAILDRMPSPTNLEPQYLMVRSVVLARQGEVDAARALWRRLLAY
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TRQPADAPPEQVLGRFLITPAVIARASAALRESGVVGPPAG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA