Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is acpP
Identifier: 103485775
GI number: 103485775
Start: 278152
End: 278388
Strand: Direct
Name: acpP
Synonym: Sala_0280
Alternate gene names: 103485775
Gene position: 278152-278388 (Clockwise)
Preceding gene: 103485774
Following gene: 103485776
Centisome position: 8.32
GC content: 56.12
Gene sequence:
>237_bases ATGAGCGATTCGGCCGAAAAGGTTAAAAAGATCGTCGTCGAACATCTGGGCGTCGAAGCCGACAAGGTCACCGAGGAAGC GAGCTTCATCGACGATCTGGGCGCCGACAGCCTCGACATCGTCGAACTGGTGATGGCGTTCGAGGAAGAGTTCGGCGTCG AAATCCCCGACGATGCGGCGGAAAAGATCGCCACCGTCAAGGATGCGATCGACTATATCGAAGCGAACAAGGGCTAA
Upstream 100 bases:
>100_bases GCTTCGGCGCATGGCTCATGCCAGCCCTCTTGCCAGCCCCGCCCATGGACACTAGGGCAATCTCCAACATTCACGAACAG GTCAGAAAAAGGAACTGTGC
Downstream 100 bases:
>100_bases GGCGGTCCGATCCGGCATGGCCGGATGCGGCGGCGACGCCGTCCAAGCGTTTCCGGCTTCCCGGTCCATGGCCCCGCGCC CTGTGACCGGGAAGCCTTTT
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSDSAEKVKKIVVEHLGVEADKVTEEASFIDDLGADSLDIVELVMAFEEEFGVEIPDDAAEKIATVKDAIDYIEANKG
Sequences:
>Translated_78_residues MSDSAEKVKKIVVEHLGVEADKVTEEASFIDDLGADSLDIVELVMAFEEEFGVEIPDDAAEKIATVKDAIDYIEANKG >Mature_77_residues SDSAEKVKKIVVEHLGVEADKVTEEASFIDDLGADSLDIVELVMAFEEEFGVEIPDDAAEKIATVKDAIDYIEANKG
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Escherichia coli, GI1787336, Length=78, Percent_Identity=62.8205128205128, Blast_Score=96, Evalue=4e-22, Organism=Drosophila melanogaster, GI17136932, Length=67, Percent_Identity=50.7462686567164, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_SPHAL (Q1GWG9)
Other databases:
- EMBL: CP000356 - RefSeq: YP_615336.1 - ProteinModelPortal: Q1GWG9 - SMR: Q1GWG9 - GeneID: 4082640 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_0280 - NMPDR: fig|317655.9.peg.255 - HOGENOM: HBG755218 - OMA: IDYITEH - ProtClustDB: PRK00982 - BioCyc: SALA317655:SALA_0280-MONOMER - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 8457; Mature: 8326
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAEKVKKIVVEHLGVEADKVTEEASFIDDLGADSLDIVELVMAFEEEFGVEIPDDAA CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH EKIATVKDAIDYIEANKG HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDSAEKVKKIVVEHLGVEADKVTEEASFIDDLGADSLDIVELVMAFEEEFGVEIPDDAA CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH EKIATVKDAIDYIEANKG HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA