Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485773
Identifier: 103485773
GI number: 103485773
Start: 275731
End: 276063
Strand: Direct
Name: 103485773
Synonym: Sala_0278
Alternate gene names: NA
Gene position: 275731-276063 (Clockwise)
Preceding gene: 103485772
Following gene: 103485774
Centisome position: 8.24
GC content: 60.06
Gene sequence:
>333_bases GTGTCGCGGACACGCTTCGCTGTGCGCCGTTCGATTGCGATGAAAAGGATCGACTTGCCGGGCGGAGAACAGGTGGGGCT GTCGAGCCGCCCGGCGAAGTCTTGGAATGAGGTCCGAGGGGTGTCGAAGGGTGCCAGGGACCAGCTCGCACCATTCGCCT TGGGCCTCACAGCGCATCGGCAAAAGCGCGATGCAGCGGTGCAAAGAATGACAGAAATCCCGTTTCGGGGCAGTTACAAG GGGTCACATGTCGGCGTGTCGCCTTTTGATAACCCTTTCTTAACCCGCTTTCGCCTTTTTCGGTCGCGCATTGGCGCGGC GTTCGACATCTGA
Upstream 100 bases:
>100_bases CGGGCCCGCCTGACCGCGGCGGGCCGGGCCGGCGGCGGCGCGGCGTGAGGGGACCGCGAAAGGGATTGCGCAGGACAAGT CCGATCCGTTCCGCGGTGGC
Downstream 100 bases:
>100_bases TATGACGATTGGCCGGCTTGTTACCGTTACGAAGGCGTTACAATGGGTGGGCGCGCCGGACGATTGGCGTATCTACCGTA TCGCCCGCCGCGGGCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSRTRFAVRRSIAMKRIDLPGGEQVGLSSRPAKSWNEVRGVSKGARDQLAPFALGLTAHRQKRDAAVQRMTEIPFRGSYK GSHVGVSPFDNPFLTRFRLFRSRIGAAFDI
Sequences:
>Translated_110_residues MSRTRFAVRRSIAMKRIDLPGGEQVGLSSRPAKSWNEVRGVSKGARDQLAPFALGLTAHRQKRDAAVQRMTEIPFRGSYK GSHVGVSPFDNPFLTRFRLFRSRIGAAFDI >Mature_109_residues SRTRFAVRRSIAMKRIDLPGGEQVGLSSRPAKSWNEVRGVSKGARDQLAPFALGLTAHRQKRDAAVQRMTEIPFRGSYKG SHVGVSPFDNPFLTRFRLFRSRIGAAFDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12318; Mature: 12187
Theoretical pI: Translated: 12.30; Mature: 12.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTRFAVRRSIAMKRIDLPGGEQVGLSSRPAKSWNEVRGVSKGARDQLAPFALGLTAHR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QKRDAAVQRMTEIPFRGSYKGSHVGVSPFDNPFLTRFRLFRSRIGAAFDI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC >Mature Secondary Structure SRTRFAVRRSIAMKRIDLPGGEQVGLSSRPAKSWNEVRGVSKGARDQLAPFALGLTAHR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QKRDAAVQRMTEIPFRGSYKGSHVGVSPFDNPFLTRFRLFRSRIGAAFDI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA