Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485772
Identifier: 103485772
GI number: 103485772
Start: 275245
End: 275643
Strand: Direct
Name: 103485772
Synonym: Sala_0277
Alternate gene names: NA
Gene position: 275245-275643 (Clockwise)
Preceding gene: 103485771
Following gene: 103485773
Centisome position: 8.23
GC content: 65.41
Gene sequence:
>399_bases ATGCTGGGCTATGTGACGATGGGCACCAACGATCTTGACCGTGCGCGCGAATTTTACGCCGCGCTGCTCGGGACGATCGG CGCCAGCGAATTGATGCGCATGTCGGACGAAGACAACGGGTTTACCCTCTATGCGACCGGCTGGGGACAGCCGGGGATCG CGGTGACGCGGCCATATGACGGCCAGCCCGCGCATCGCGGCAACGGGCATATGGCGGCGATTGTCGTCGATAGCCGTGCC AAGGTCGATTCGCTTCACGCCAAGGCGCTCGAACTGGGCGGTACATGCGAAGGCGCGCCGGGCGTGCGCGGCGACGAGGG CGAGCAGGCGTTTTACGGCGCCTATTTCCGCGACCTCGACGGCAACAAGCTTTGCGCCTTCCGGATCGGGCCCGCCTGA
Upstream 100 bases:
>100_bases CAAGGCACCGGCTACAACCTGAAACCCCGGGTAATTGCCGGATGATGGGGGCGTCAGCCATGCTGGCGCCCTTGTCGGTT GGATGAGAAGGGAGCGTGTA
Downstream 100 bases:
>100_bases CCGCGGCGGGCCGGGCCGGCGGCGGCGCGGCGTGAGGGGACCGCGAAAGGGATTGCGCAGGACAAGTCCGATCCGTTCCG CGGTGGCGTGTCGCGGACAC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Dioxygenase; Lactoylglutathione Lyase Protein; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Dioxygenase; Isocitrate Dehydrogenase; Glyoxalase/Bleomycin Resistance Dioxygenase; Glyoxalase Family Protein Family Protein; Dioxygenase-Family Protein
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLGYVTMGTNDLDRAREFYAALLGTIGASELMRMSDEDNGFTLYATGWGQPGIAVTRPYDGQPAHRGNGHMAAIVVDSRA KVDSLHAKALELGGTCEGAPGVRGDEGEQAFYGAYFRDLDGNKLCAFRIGPA
Sequences:
>Translated_132_residues MLGYVTMGTNDLDRAREFYAALLGTIGASELMRMSDEDNGFTLYATGWGQPGIAVTRPYDGQPAHRGNGHMAAIVVDSRA KVDSLHAKALELGGTCEGAPGVRGDEGEQAFYGAYFRDLDGNKLCAFRIGPA >Mature_132_residues MLGYVTMGTNDLDRAREFYAALLGTIGASELMRMSDEDNGFTLYATGWGQPGIAVTRPYDGQPAHRGNGHMAAIVVDSRA KVDSLHAKALELGGTCEGAPGVRGDEGEQAFYGAYFRDLDGNKLCAFRIGPA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14062; Mature: 14062
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYVTMGTNDLDRAREFYAALLGTIGASELMRMSDEDNGFTLYATGWGQPGIAVTRPYD CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCC GQPAHRGNGHMAAIVVDSRAKVDSLHAKALELGGTCEGAPGVRGDEGEQAFYGAYFRDLD CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHEEECCC GNKLCAFRIGPA CCEEEEEEECCC >Mature Secondary Structure MLGYVTMGTNDLDRAREFYAALLGTIGASELMRMSDEDNGFTLYATGWGQPGIAVTRPYD CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCC GQPAHRGNGHMAAIVVDSRAKVDSLHAKALELGGTCEGAPGVRGDEGEQAFYGAYFRDLD CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHEEECCC GNKLCAFRIGPA CCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA