Definition | Sphingopyxis alaskensis RB2256, complete genome. |
---|---|
Accession | NC_008048 |
Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is pspB [C]
Identifier: 103485704
GI number: 103485704
Start: 222054
End: 222329
Strand: Direct
Name: pspB [C]
Synonym: Sala_0208
Alternate gene names: 103485704
Gene position: 222054-222329 (Clockwise)
Preceding gene: 103485703
Following gene: 103485705
Centisome position: 6.64
GC content: 55.43
Gene sequence:
>276_bases ATGGAAGAAGTCATCATCGTCCCGATCGTCATCGGAACGCTCTTCCTCGGTCTGCCCTGGCTGATCCTCCACTATATCAC CAAGTGGAAACAGGCCAAGACGCTGACCGGAGAAGATGAACAGCTGCTCGACGAACTTTACGATACGGCCAGACGGCTCG AGAATCGTCTACATACCGTCGAACGGATTATCAGCGCCGACCATCCCGACTTCCGCCCCGCGGTACGCAGCGATGAAGAG CTGGCGCAGCTTGAAAACATAAACCGGAGGAACTGA
Upstream 100 bases:
>100_bases GCTCGACGAAGAGATCGCCGAACTTCAGGCTGCCGACAAGGTCGCCGACGAGCTCGCCGCGCTGAAGGCCGCGCAGGCCA AGAAATAAGGAGCCGGACCG
Downstream 100 bases:
>100_bases GATGTCTGCCAGCCGCACCAAATTCTACCTCGACAAACAGAACGCCAAATGGAGCGGCGTATGTTCGGGAATCGCGGACT ATAGCGGGATCGACGTGCTC
Product: phage shock B
Products: NA
Alternate protein names: Phage Shock B; Phage Shock B Family Protein
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MEEVIIVPIVIGTLFLGLPWLILHYITKWKQAKTLTGEDEQLLDELYDTARRLENRLHTVERIISADHPDFRPAVRSDEE LAQLENINRRN
Sequences:
>Translated_91_residues MEEVIIVPIVIGTLFLGLPWLILHYITKWKQAKTLTGEDEQLLDELYDTARRLENRLHTVERIISADHPDFRPAVRSDEE LAQLENINRRN >Mature_91_residues MEEVIIVPIVIGTLFLGLPWLILHYITKWKQAKTLTGEDEQLLDELYDTARRLENRLHTVERIISADHPDFRPAVRSDEE LAQLENINRRN
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspb Is Involved In Transcription Regulation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10691; Mature: 10691
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVIIVPIVIGTLFLGLPWLILHYITKWKQAKTLTGEDEQLLDELYDTARRLENRLHTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ERIISADHPDFRPAVRSDEELAQLENINRRN HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MEEVIIVPIVIGTLFLGLPWLILHYITKWKQAKTLTGEDEQLLDELYDTARRLENRLHTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ERIISADHPDFRPAVRSDEELAQLENINRRN HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA