| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081025
Identifier: 99081025
GI number: 99081025
Start: 1273898
End: 1274194
Strand: Direct
Name: 99081025
Synonym: TM1040_1184
Alternate gene names: NA
Gene position: 1273898-1274194 (Clockwise)
Preceding gene: 99081022
Following gene: 99081026
Centisome position: 39.8
GC content: 59.93
Gene sequence:
>297_bases ATGCCAGACGTCACCATCGTTTATTGGCGCGACATCCCGGCCCAGGTCATTGTGGGCAAGGGGCGACGGGGTGCGAAACG CCAGCTTGAAGAGCGCTTTGAGCAGGCGATTGATCGCGCCGCAATGAAGGTGAACGCCAAGGATAGCGACGCCTATCTCG CGGAATGGCGCAAAGCCGCACCTTTCAGCGTGGAGGGTGAGCCTGGTGATATTGCCGAAGCAGAGGCCACGCGTCTGGAG CAGGAATACGATCAGGACCGCCTCAAGGCCTTGATCGCAAACGATGGCTGGGCATGA
Upstream 100 bases:
>100_bases AACGTCGCTCCTCCCATCTTTGTTGTCGAAATCCGACGCACCCGACCTTTGGCGGCGGACTAGAAACGCAGTACGACAGA CGGATCTGAAAGGAACGGCA
Downstream 100 bases:
>100_bases CAGCCCTCAACGCATTATGGGAGGCCGCCATGGCTTTGCTGAACTTCAAAAAACGTGCGGCTGACACAGAGATCACCGTG AACCCGGACGTGGAGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPDVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVNAKDSDAYLAEWRKAAPFSVEGEPGDIAEAEATRLE QEYDQDRLKALIANDGWA
Sequences:
>Translated_98_residues MPDVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVNAKDSDAYLAEWRKAAPFSVEGEPGDIAEAEATRLE QEYDQDRLKALIANDGWA >Mature_97_residues PDVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVNAKDSDAYLAEWRKAAPFSVEGEPGDIAEAEATRLEQ EYDQDRLKALIANDGWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11077; Mature: 10946
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVNAKDSDAYLAEWRKAA CCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PFSVEGEPGDIAEAEATRLEQEYDQDRLKALIANDGWA CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCC >Mature Secondary Structure PDVTIVYWRDIPAQVIVGKGRRGAKRQLEERFEQAIDRAAMKVNAKDSDAYLAEWRKAA CCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC PFSVEGEPGDIAEAEATRLEQEYDQDRLKALIANDGWA CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA