Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081022

Identifier: 99081022

GI number: 99081022

Start: 1271442

End: 1271687

Strand: Direct

Name: 99081022

Synonym: TM1040_1181

Alternate gene names: NA

Gene position: 1271442-1271687 (Clockwise)

Preceding gene: 99081021

Following gene: 99081025

Centisome position: 39.72

GC content: 62.2

Gene sequence:

>246_bases
GTGGATTTACGGGTCGCGTTTCGGGGGAACCTTTTTATGTCACAGACTGCTTTGCCTTCGGGCCGTGCTAAGCTCCTGGA
ACTGACCCGCTCGGTCGTAACGCAGAGTCATGCGCGCGCGGGACTGGCGCGCCGCGCGACTGAAAAGCCCGGCATGCCGG
GCGCAAGCAACAGTGATCCGCTCCTGTCGCTCAGAGATCTCGCGGTAAAGTCGCTGCGCCCCAAAGCGATGCGCGACAGA
GGTTAG

Upstream 100 bases:

>100_bases
CGCGATGCCTGATCTGTCGTCTTAAATTGTCCTGAAGCGCACGTTTTTCGCCGTATTTCAGCCCAGAGCTTGACCAGGCC
TACGCAGTAGCTAGGAGGAG

Downstream 100 bases:

>100_bases
ACACCGCTTTTGATGTTCGGCGGGTGAAGATCAGCCTCTAAAGCCTGTCGCCACAACAAATTTCTCCGAACTGTCAGCCC
GTGAGGAGGGCGGCTTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MDLRVAFRGNLFMSQTALPSGRAKLLELTRSVVTQSHARAGLARRATEKPGMPGASNSDPLLSLRDLAVKSLRPKAMRDR
G

Sequences:

>Translated_81_residues
MDLRVAFRGNLFMSQTALPSGRAKLLELTRSVVTQSHARAGLARRATEKPGMPGASNSDPLLSLRDLAVKSLRPKAMRDR
G
>Mature_81_residues
MDLRVAFRGNLFMSQTALPSGRAKLLELTRSVVTQSHARAGLARRATEKPGMPGASNSDPLLSLRDLAVKSLRPKAMRDR
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8802; Mature: 8802

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRVAFRGNLFMSQTALPSGRAKLLELTRSVVTQSHARAGLARRATEKPGMPGASNSDP
CCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LLSLRDLAVKSLRPKAMRDRG
CHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDLRVAFRGNLFMSQTALPSGRAKLLELTRSVVTQSHARAGLARRATEKPGMPGASNSDP
CCCEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LLSLRDLAVKSLRPKAMRDRG
CHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA