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The map label for this gene is 99081003

Identifier: 99081003

GI number: 99081003

Start: 1251838

End: 1252422

Strand: Direct

Name: 99081003

Synonym: TM1040_1162

Alternate gene names: NA

Gene position: 1251838-1252422 (Clockwise)

Preceding gene: 99081001

Following gene: 99081007

Centisome position: 39.11

GC content: 57.61

Gene sequence:

>585_bases
ATGGACGGAGACTTCAGGACAGAATTCGTAAGAGAGCCGCGGGCTCTGAAGCAGCACCCGGCTTTGGTGCTCAATGCGGA
TTATCGTCCTTTGTCATACTATCCCTTGTCACTCTGGCCATGGCAGGACGCCGTCAAAGCCGCATGGCTCGACCGGGTTG
CCATCGTGGCCGAGTATGACGAGGTTGTGCGCAGTCCCAGCACCGAAATCCGAATACCTTCGGTTGTGGTACTGAAAGAT
TTTGTCAAACCCCAAAAGCGCGTGGCCTTCACGCGCTTTAATTTATTCTTGCGCGACGAATTTCGCTGTCAGTACTGCGG
CGCAAAGGGAGACCTTACCTTTGATCATGTGGTGCCGCGCGCCTCTGGGGGGATCACCAGCTGGGAGAACGTGGTCGCGG
CCTGCTCGCGTTGCAACCTGAAGAAAGGCTCCAAACCGCTGCACCGTGCGGGCATGTCCCTGCGCAAACCGCCGCGCCGT
CCGGGCGCGGAAGAGCTGCGCAATATGGGGCGGAAGTTTCCACCCGGATACCTGCATGAAAGCTGGATGGACTACCTCTA
TTGGGATAGTGAGCTTGAGGCTTGA

Upstream 100 bases:

>100_bases
GGCTTGTCAGGTTCCGGCCACGATATATAGTTAATCTCAAGCTGGGGCGGGTTCCCCGCTCTGGTGCCATCTCGAGGCAA
GCAGGGCGAGGAAGACGTTT

Downstream 100 bases:

>100_bases
AGCCCTTGATTTAAAAAGAAAAGCGCGCCATCGAGGGGCGCGCTTTTGTCGTCAGGCCTTGGCGCGCTGCACCATGCCAA
AGAGATCGCGCGGATCATCC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDGDFRTEFVREPRALKQHPALVLNADYRPLSYYPLSLWPWQDAVKAAWLDRVAIVAEYDEVVRSPSTEIRIPSVVVLKD
FVKPQKRVAFTRFNLFLRDEFRCQYCGAKGDLTFDHVVPRASGGITSWENVVAACSRCNLKKGSKPLHRAGMSLRKPPRR
PGAEELRNMGRKFPPGYLHESWMDYLYWDSELEA

Sequences:

>Translated_194_residues
MDGDFRTEFVREPRALKQHPALVLNADYRPLSYYPLSLWPWQDAVKAAWLDRVAIVAEYDEVVRSPSTEIRIPSVVVLKD
FVKPQKRVAFTRFNLFLRDEFRCQYCGAKGDLTFDHVVPRASGGITSWENVVAACSRCNLKKGSKPLHRAGMSLRKPPRR
PGAEELRNMGRKFPPGYLHESWMDYLYWDSELEA
>Mature_194_residues
MDGDFRTEFVREPRALKQHPALVLNADYRPLSYYPLSLWPWQDAVKAAWLDRVAIVAEYDEVVRSPSTEIRIPSVVVLKD
FVKPQKRVAFTRFNLFLRDEFRCQYCGAKGDLTFDHVVPRASGGITSWENVVAACSRCNLKKGSKPLHRAGMSLRKPPRR
PGAEELRNMGRKFPPGYLHESWMDYLYWDSELEA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22433; Mature: 22433

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGDFRTEFVREPRALKQHPALVLNADYRPLSYYPLSLWPWQDAVKAAWLDRVAIVAEYD
CCCCHHHHHHHCCHHHHHCCCEEEECCCCCCEECCCEECCHHHHHHHHHHHHHHHHHHHH
EVVRSPSTEIRIPSVVVLKDFVKPQKRVAFTRFNLFLRDEFRCQYCGAKGDLTFDHVVPR
HHHHCCCCCEECCHHHHHHHHHCHHHHHHHHHHHEEEECCCEEEECCCCCCCCHHHHCCC
ASGGITSWENVVAACSRCNLKKGSKPLHRAGMSLRKPPRRPGAEELRNMGRKFPPGYLHE
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH
SWMDYLYWDSELEA
HHHHHHHCCCCCCC
>Mature Secondary Structure
MDGDFRTEFVREPRALKQHPALVLNADYRPLSYYPLSLWPWQDAVKAAWLDRVAIVAEYD
CCCCHHHHHHHCCHHHHHCCCEEEECCCCCCEECCCEECCHHHHHHHHHHHHHHHHHHHH
EVVRSPSTEIRIPSVVVLKDFVKPQKRVAFTRFNLFLRDEFRCQYCGAKGDLTFDHVVPR
HHHHCCCCCEECCHHHHHHHHHCHHHHHHHHHHHEEEECCCEEEECCCCCCCCHHHHCCC
ASGGITSWENVVAACSRCNLKKGSKPLHRAGMSLRKPPRRPGAEELRNMGRKFPPGYLHE
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH
SWMDYLYWDSELEA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA