| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081001
Identifier: 99081001
GI number: 99081001
Start: 1250605
End: 1250919
Strand: Direct
Name: 99081001
Synonym: TM1040_1160
Alternate gene names: NA
Gene position: 1250605-1250919 (Clockwise)
Preceding gene: 99080999
Following gene: 99081003
Centisome position: 39.07
GC content: 60.0
Gene sequence:
>315_bases ATGAAACTGATTTCACCGCTTGAGTTTACCGGCACGCGTGCATGGGATGCGCTTGATATTGAACGATTTACCGGTGCCAC CACGGTCCGGTTGCATTGGACGGATCAAGCCTATGTCTGGCATGTCAACGACGGGGCCGAGGTCTTTGTCGTGCTCAAGG GTGCGGTCGATATGCATGTGCGCCAGACCGGTCGGGAGGAGGTCTTCTCGCTGTCGGAGGGGGATATCTTTCACGCCGAG GCCGGGGACGAGCATGTGGCGCATCCGCGGGGTGCGGCGCGTGTCCTCGTGATCGAAGCTGAGGGCAGCATCTGA
Upstream 100 bases:
>100_bases CGGTCCAAAACAGCGAAACGCCGTCATTTTCCGTCGCTCTGCGGGCTGTTGTTGCGTCCATTCGTAAAAGATCATGCGCG CTATCAGAATGGAGAGAAAG
Downstream 100 bases:
>100_bases TCTGATTAGCCGTCGCGGCGCTGCCGGGGCTTGCGGGCAGGTGTCGCCGTGGCGCGCCGTTTTGCGGCATGCTTGCGATG CGGTTTGGCCGCGGGCTTTG
Product: cupin 2, barrel
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Mannose-6-Phosphate Isomerase; DSBH Domain-Containing Protein; Dsbh Domain Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MKLISPLEFTGTRAWDALDIERFTGATTVRLHWTDQAYVWHVNDGAEVFVVLKGAVDMHVRQTGREEVFSLSEGDIFHAE AGDEHVAHPRGAARVLVIEAEGSI
Sequences:
>Translated_104_residues MKLISPLEFTGTRAWDALDIERFTGATTVRLHWTDQAYVWHVNDGAEVFVVLKGAVDMHVRQTGREEVFSLSEGDIFHAE AGDEHVAHPRGAARVLVIEAEGSI >Mature_104_residues MKLISPLEFTGTRAWDALDIERFTGATTVRLHWTDQAYVWHVNDGAEVFVVLKGAVDMHVRQTGREEVFSLSEGDIFHAE AGDEHVAHPRGAARVLVIEAEGSI
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11542; Mature: 11542
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLISPLEFTGTRAWDALDIERFTGATTVRLHWTDQAYVWHVNDGAEVFVVLKGAVDMHV CCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCEEEE RQTGREEVFSLSEGDIFHAEAGDEHVAHPRGAARVLVIEAEGSI ECCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MKLISPLEFTGTRAWDALDIERFTGATTVRLHWTDQAYVWHVNDGAEVFVVLKGAVDMHV CCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCEEEE RQTGREEVFSLSEGDIFHAEAGDEHVAHPRGAARVLVIEAEGSI ECCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA