Click here to switch to the map view.

The map label for this gene is ypfH [C]

Identifier: 99080999

GI number: 99080999

Start: 1249366

End: 1250031

Strand: Direct

Name: ypfH [C]

Synonym: TM1040_1158

Alternate gene names: 99080999

Gene position: 1249366-1250031 (Clockwise)

Preceding gene: 99080998

Following gene: 99081001

Centisome position: 39.03

GC content: 64.11

Gene sequence:

>666_bases
ATGACTCGCGTTTTGACTGCCGGCCGCAAAGAGCCGCTCTCCGGGGAAACTCGTTCTGCCGTGGTGTTTCTGCACGGCTA
TGGCGCCAATGGGGCTGACCTTCTGGGCCTTGCCGATCCGCTGGCTGAACATCTGCCTGACACCCTGTTTGTGGCGCCGG
ATGCGCCCGAGGCCTGCGCCGGGGCGCCGATGGGCTATCAGTGGTTCCCGATCCCGTGGATCGATGGCTCTTCCGAGGAA
GAATCCATGCGCGGCATGATGGCGGCGGTTGAGGATCTCAATGCGTTTCTCGACGCGCTTATGGTCGACGAGGATCTGCT
GCCCGAGCAGGTGGTGCTCTTGGGCTTTTCGCAAGGCACCATGATGGCGCTGCATGTCGCCCCGCGCCGCGAAGATCCGG
TGGCGGGTATTGTTGCATTCTCGGGGCGCTTGCTCTCGCCCGAGACGTTCAGCGACGAGGTCGTGAGCCGGATGCCTGTG
CTTCTGGTGCATGGCGACCAGGACGACGTCGTGCCGCCGCAATCGCTGCCGCAGGCGGCCGAAGCCTTGCAGGAGGCGGG
CTTTCGGGATGTGTTTGCCCATGTGATGAAGGGAACCGGCCATGGGATCGCCCCCGATGGGCTGAGCGTGGCGCTTGCCT
TCATGCGCGACAAGCTGAGCCTCTGA

Upstream 100 bases:

>100_bases
CCCTGCGCGAGATGGCAGAGGCCTGGTCACCGTGGCGCTCGGTTGCGGCGCGGCTTTTGTGGGCCTATTACCATGTGGCA
AAGGACAGGGAAGGGATCCG

Downstream 100 bases:

>100_bases
CGGGCGAACTAGCAAGCGTTCAGCGCTGTTCTTTAAGGATAATCTGAGATTGGGCCCGCTCGATGAGCGGGCTCTTTGCT
ATTTGGTCATTGAGCTGCGT

Product: phospholipase/carboxylesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTRVLTAGRKEPLSGETRSAVVFLHGYGANGADLLGLADPLAEHLPDTLFVAPDAPEACAGAPMGYQWFPIPWIDGSSEE
ESMRGMMAAVEDLNAFLDALMVDEDLLPEQVVLLGFSQGTMMALHVAPRREDPVAGIVAFSGRLLSPETFSDEVVSRMPV
LLVHGDQDDVVPPQSLPQAAEALQEAGFRDVFAHVMKGTGHGIAPDGLSVALAFMRDKLSL

Sequences:

>Translated_221_residues
MTRVLTAGRKEPLSGETRSAVVFLHGYGANGADLLGLADPLAEHLPDTLFVAPDAPEACAGAPMGYQWFPIPWIDGSSEE
ESMRGMMAAVEDLNAFLDALMVDEDLLPEQVVLLGFSQGTMMALHVAPRREDPVAGIVAFSGRLLSPETFSDEVVSRMPV
LLVHGDQDDVVPPQSLPQAAEALQEAGFRDVFAHVMKGTGHGIAPDGLSVALAFMRDKLSL
>Mature_220_residues
TRVLTAGRKEPLSGETRSAVVFLHGYGANGADLLGLADPLAEHLPDTLFVAPDAPEACAGAPMGYQWFPIPWIDGSSEEE
SMRGMMAAVEDLNAFLDALMVDEDLLPEQVVLLGFSQGTMMALHVAPRREDPVAGIVAFSGRLLSPETFSDEVVSRMPVL
LVHGDQDDVVPPQSLPQAAEALQEAGFRDVFAHVMKGTGHGIAPDGLSVALAFMRDKLSL

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87082111, Length=198, Percent_Identity=28.2828282828283, Blast_Score=61, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323147, Length=231, Percent_Identity=29.004329004329, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003140 [H]

Pfam domain/function: PF02230 Abhydrolase_2 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 23564; Mature: 23433

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVLTAGRKEPLSGETRSAVVFLHGYGANGADLLGLADPLAEHLPDTLFVAPDAPEACA
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHC
GAPMGYQWFPIPWIDGSSEEESMRGMMAAVEDLNAFLDALMVDEDLLPEQVVLLGFSQGT
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
MMALHVAPRREDPVAGIVAFSGRLLSPETFSDEVVSRMPVLLVHGDQDDVVPPQSLPQAA
EEEEEECCCCCCCCEEEEEECCEECCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHH
EALQEAGFRDVFAHVMKGTGHGIAPDGLSVALAFMRDKLSL
HHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRVLTAGRKEPLSGETRSAVVFLHGYGANGADLLGLADPLAEHLPDTLFVAPDAPEACA
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHC
GAPMGYQWFPIPWIDGSSEEESMRGMMAAVEDLNAFLDALMVDEDLLPEQVVLLGFSQGT
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
MMALHVAPRREDPVAGIVAFSGRLLSPETFSDEVVSRMPVLLVHGDQDDVVPPQSLPQAA
EEEEEECCCCCCCCEEEEEECCEECCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHH
EALQEAGFRDVFAHVMKGTGHGIAPDGLSVALAFMRDKLSL
HHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]