| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080906
Identifier: 99080906
GI number: 99080906
Start: 1142485
End: 1142898
Strand: Direct
Name: 99080906
Synonym: TM1040_1065
Alternate gene names: NA
Gene position: 1142485-1142898 (Clockwise)
Preceding gene: 99080905
Following gene: 99080907
Centisome position: 35.69
GC content: 60.87
Gene sequence:
>414_bases ATGAGTGCTCAAAACGGCAAGGATCTCCTGATCAAGGTGGATATGACCGGCACCGGAAGTTTCACCACCATCGCAGGCCT GCGCGCCACCCGTATCAGTTTCAACGCCGAGAGCGTTGATGTGACCAGTCTCGACAGCGCGGGCGGTTGGCGTGAGCTGT TGGGCGGTGCGGGTGTGCGCTCGGCAAACCTTTCGGGCTCTGGCGTGTTTCGCGATGCGGATACTGATGAGCGCGCGCGG CAGCTGTTCTTTGATGGCGAGACACCGGCGTTTCAGGTGGTGATCCCGGATTTTGGTACAGTTGAAGGGCCATTTCAGGT CACGGCACTGGAATACGCCGGGAGCCACAATGGCGAGGCCACCTATGAGCTGTCGCTGGCCTCTGCCGGTGCGCTGACCT TTACGGCGGCCTGA
Upstream 100 bases:
>100_bases AACGCCTGAGCAACGGGGATCGCTCCATCGCGCTGCGGTTTTCCGCGCGTCTCGAAGACTCCTGACATGATTTCAACGCA TTAGCATAAGGACCTCTCTC
Downstream 100 bases:
>100_bases GCCATGGCAAACCCCTACCGAGGCGAAGTGACGCTGGTGCTCAACGGCCAGCCGCAGGTGCTGAAGCTGACACTGGGTGC GCTGGCAGAACTGGAGGCGG
Product: Phage major tail protein, TP901-1
Products: NA
Alternate protein names: Phage Tail Protein -1 Family; Gene Transfer Agent Orf; Phage Protein; Tail Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSAQNGKDLLIKVDMTGTGSFTTIAGLRATRISFNAESVDVTSLDSAGGWRELLGGAGVRSANLSGSGVFRDADTDERAR QLFFDGETPAFQVVIPDFGTVEGPFQVTALEYAGSHNGEATYELSLASAGALTFTAA
Sequences:
>Translated_137_residues MSAQNGKDLLIKVDMTGTGSFTTIAGLRATRISFNAESVDVTSLDSAGGWRELLGGAGVRSANLSGSGVFRDADTDERAR QLFFDGETPAFQVVIPDFGTVEGPFQVTALEYAGSHNGEATYELSLASAGALTFTAA >Mature_136_residues SAQNGKDLLIKVDMTGTGSFTTIAGLRATRISFNAESVDVTSLDSAGGWRELLGGAGVRSANLSGSGVFRDADTDERARQ LFFDGETPAFQVVIPDFGTVEGPFQVTALEYAGSHNGEATYELSLASAGALTFTAA
Specific function: Unknown
COG id: COG5437
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14245; Mature: 14114
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQNGKDLLIKVDMTGTGSFTTIAGLRATRISFNAESVDVTSLDSAGGWRELLGGAGVR CCCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHCCCCCC SANLSGSGVFRDADTDERARQLFFDGETPAFQVVIPDFGTVEGPFQVTALEYAGSHNGEA CCCCCCCEEEECCCCCCHHHEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCE TYELSLASAGALTFTAA EEEEEECCCCEEEEEEC >Mature Secondary Structure SAQNGKDLLIKVDMTGTGSFTTIAGLRATRISFNAESVDVTSLDSAGGWRELLGGAGVR CCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCCCCEEEEECCCCCCHHHHHCCCCCC SANLSGSGVFRDADTDERARQLFFDGETPAFQVVIPDFGTVEGPFQVTALEYAGSHNGEA CCCCCCCEEEECCCCCCHHHEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCE TYELSLASAGALTFTAA EEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA