The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080904

Identifier: 99080904

GI number: 99080904

Start: 1141707

End: 1142045

Strand: Direct

Name: 99080904

Synonym: TM1040_1063

Alternate gene names: NA

Gene position: 1141707-1142045 (Clockwise)

Preceding gene: 99080903

Following gene: 99080905

Centisome position: 35.67

GC content: 66.96

Gene sequence:

>339_bases
ATGAGCGCGCCACGTCTGAACCGCCTGTTGCACCTCGAAGATCCACAAGCGACCGGTGACGGCGCCGGAGGGTTTGAGGT
GACTTGGGTTGTGCTGGGCCAGCACTGGGCCGAGGTTGATGCGCTCACGGGGCGCGAAACGGGGCGCGGCGGCACCTCAC
TGTCGCTCCAGCGCTATCGGATCATCCTGCGCGCCGCCCCTCAGGGCTCATCTGCGCGGCCCCGGCCGGACCAGCGGTTT
CGCGAGGGCAGTCGCATCTACAAGATCGATGCGGTGGCCGAGCATGACCCGCAGGGGCGGTACCTCCAGTGTTTTGCAAC
CGAGGAGCTGGCCACATGA

Upstream 100 bases:

>100_bases
ACACCTCCTTGCATGCAGGCTGCATGCCCTTTGGGGTGGCGAGCCTCTTGGACCGCCACCGGATGCCGCGCCTGAGCCTG
GCCCGGAGCGAGGTGCAATC

Downstream 100 bases:

>100_bases
CCTATGCGCTGTCTCACAGCCTGCAAACCGCGGTATATCAACACCTTATGGCCGACGCGGCGCTGGCCGCCGAGGTGGGC
ACTGCGATCTATGACATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Head-Tail Adaptor

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRF
REGSRIYKIDAVAEHDPQGRYLQCFATEELAT

Sequences:

>Translated_112_residues
MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRF
REGSRIYKIDAVAEHDPQGRYLQCFATEELAT
>Mature_111_residues
SAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYRIILRAAPQGSSARPRPDQRFR
EGSRIYKIDAVAEHDPQGRYLQCFATEELAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12404; Mature: 12273

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYR
CCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCEEEHEEEE
IILRAAPQGSSARPRPDQRFREGSRIYKIDAVAEHDPQGRYLQCFATEELAT
EEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SAPRLNRLLHLEDPQATGDGAGGFEVTWVVLGQHWAEVDALTGRETGRGGTSLSLQRYR
CCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCEEEHEEEE
IILRAAPQGSSARPRPDQRFREGSRIYKIDAVAEHDPQGRYLQCFATEELAT
EEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA