The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080901

Identifier: 99080901

GI number: 99080901

Start: 1139140

End: 1139712

Strand: Direct

Name: 99080901

Synonym: TM1040_1060

Alternate gene names: NA

Gene position: 1139140-1139712 (Clockwise)

Preceding gene: 99080900

Following gene: 99080902

Centisome position: 35.59

GC content: 67.36

Gene sequence:

>573_bases
ATGCTGACAGAGCATGCCCCCGAGCTTGAGACCAAATTCGCCCGTTTTGGTGAGGCGCTGACCCTGACTGAGGGCGAGGT
GATCGAAGGCTACGCAAGCCTCTTTGGCGTGGCCGATCAAGGCAAGGATATCGTCACGCGTGGCGCTTATGCGGCCTCGC
TGGCGGCGCATCAGGCGCGCGGCAGCAAGGTCAAGATGCTCTGGCAGCATGACCCGAGCCACCCCATCGGTGTCTGGGAC
GAAATCCTTGAGGACGAGACCGGCCTGCGCGTCAAAGGCCGTATCCTGACAGAAACCCAGAAAGGCGCCGAGGCCGCCGC
CCTGGTGCGCGCGGGCGCCATCGAGGGGCTGTCGATCGGCTATCGCACCCTCAAGGCCACCCGCGACAAGGAAGGCCATC
GCCGGCTTGAGGACCTCGCCCTCTGGGAGGTGTCTCTGGTGACGTTTCCGATGCTGCCCTCCGCGCGGGTGTCCCGCACG
GCCCGCCGCGCGGCAGAGGCCGCGAAATCCGACGCCCCCGAGGCGGGGCTGCGCGCGCTTGCCGAAGCGCTGCGGGCCGC
CACCAATCCCTAA

Upstream 100 bases:

>100_bases
TACGGCGTTGCTGCCGTGATCCTTGCGCAGGCCTTTCAGGGCTTTCTCTCCGTGCAGATGCCCTGAGTGATTATTTTAGT
TTCCAGAGAGGTAGAGCGAT

Downstream 100 bases:

>100_bases
CCCCCGAAAGAGGATCAGAGATGACAGACCATCCCTTCACGGGCCACGCGCCCGAGGATGCGGCGACCCCGCCGCAGAAT
GTGGCCACGGAAGTGAAACA

Product: peptidase U35, phage prohead HK97

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Phage Pro-Head Protease

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLTEHAPELETKFARFGEALTLTEGEVIEGYASLFGVADQGKDIVTRGAYAASLAAHQARGSKVKMLWQHDPSHPIGVWD
EILEDETGLRVKGRILTETQKGAEAAALVRAGAIEGLSIGYRTLKATRDKEGHRRLEDLALWEVSLVTFPMLPSARVSRT
ARRAAEAAKSDAPEAGLRALAEALRAATNP

Sequences:

>Translated_190_residues
MLTEHAPELETKFARFGEALTLTEGEVIEGYASLFGVADQGKDIVTRGAYAASLAAHQARGSKVKMLWQHDPSHPIGVWD
EILEDETGLRVKGRILTETQKGAEAAALVRAGAIEGLSIGYRTLKATRDKEGHRRLEDLALWEVSLVTFPMLPSARVSRT
ARRAAEAAKSDAPEAGLRALAEALRAATNP
>Mature_190_residues
MLTEHAPELETKFARFGEALTLTEGEVIEGYASLFGVADQGKDIVTRGAYAASLAAHQARGSKVKMLWQHDPSHPIGVWD
EILEDETGLRVKGRILTETQKGAEAAALVRAGAIEGLSIGYRTLKATRDKEGHRRLEDLALWEVSLVTFPMLPSARVSRT
ARRAAEAAKSDAPEAGLRALAEALRAATNP

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20512; Mature: 20512

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEHAPELETKFARFGEALTLTEGEVIEGYASLFGVADQGKDIVTRGAYAASLAAHQAR
CCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GSKVKMLWQHDPSHPIGVWDEILEDETGLRVKGRILTETQKGAEAAALVRAGAIEGLSIG
CCEEEEEEECCCCCCCCHHHHHHCCCCCCEEECEEECCCCCCHHHHHHHHHCCCCCHHHH
YRTLKATRDKEGHRRLEDLALWEVSLVTFPMLPSARVSRTARRAAEAAKSDAPEAGLRAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
AEALRAATNP
HHHHHHCCCC
>Mature Secondary Structure
MLTEHAPELETKFARFGEALTLTEGEVIEGYASLFGVADQGKDIVTRGAYAASLAAHQAR
CCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
GSKVKMLWQHDPSHPIGVWDEILEDETGLRVKGRILTETQKGAEAAALVRAGAIEGLSIG
CCEEEEEEECCCCCCCCHHHHHHCCCCCCEEECEEECCCCCCHHHHHHHHHCCCCCHHHH
YRTLKATRDKEGHRRLEDLALWEVSLVTFPMLPSARVSRTARRAAEAAKSDAPEAGLRAL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
AEALRAATNP
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA