The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yceI [C]

Identifier: 99080888

GI number: 99080888

Start: 1126045

End: 1126620

Strand: Direct

Name: yceI [C]

Synonym: TM1040_1047

Alternate gene names: 99080888

Gene position: 1126045-1126620 (Clockwise)

Preceding gene: 99080887

Following gene: 99080889

Centisome position: 35.18

GC content: 57.99

Gene sequence:

>576_bases
ATGAAAAAGATCCTCCTTGCTGCTGCGCTGATCGGCACCACTGCGACCACTGCTTTTGCAGCCCCCGAGAAGTACACGCT
GGATGCGAGCCACAGCCAGATCCTGTTCAACTACAACCACCTTGGTTACTCGACCACTTGGGGCATGTTCTCCGGCTTTG
AAGGCGAGATCATGTTCGATCAGGAAGATCCGGCGAACTCCTCCGTGTCCGTGTCCATGCCCGTGAAATCCATGTTCACC
GGCTGGGAAGGTCGTTTCAACCACTTCATGTCCGATGACTTCTTTGGCGCGACCGACGACGAGATGGTGTCCTTCACCTC
CACCGCGATCGAAGTGACCGGCGAGGACACCGCCAAGATCACCGGCGATCTGACCCTCAACGGTGTGACCAAATCCGTGG
TGCTGGATGCCAAGCTCAACAAAGTCGGCGAGCACCCGATGGCAAAGAAACCCTGGGCGGGCTTTGACGCCACCACCACT
CTGGTACGCTCTGAGTACGAGCTGGGCCAGTTCGCGCCCTTCGTCAGCGACGAGGTCGAAGTGCAGATCTCTGTCGAGGC
GATGAAGGCCGAGTAA

Upstream 100 bases:

>100_bases
CATTTCCCAACATCACATGTTGGGTTTTGCGGACTAGCTGAAGCCAACCGCATCGCCGACATTAGACCCATCAAACACAC
ACACTCTGGAGCCCAGACAC

Downstream 100 bases:

>100_bases
CGGCGACCCCACTCACGGCGCCAATCGACCACTGGTCCCTCGGGGCCGGTGGTTTTTTGTTGCCGTGCTGCGCCTGCTGA
TCCCGCATGGGCAGCTCTGC

Product: YceI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKKILLAAALIGTTATTAFAAPEKYTLDASHSQILFNYNHLGYSTTWGMFSGFEGEIMFDQEDPANSSVSVSMPVKSMFT
GWEGRFNHFMSDDFFGATDDEMVSFTSTAIEVTGEDTAKITGDLTLNGVTKSVVLDAKLNKVGEHPMAKKPWAGFDATTT
LVRSEYELGQFAPFVSDEVEVQISVEAMKAE

Sequences:

>Translated_191_residues
MKKILLAAALIGTTATTAFAAPEKYTLDASHSQILFNYNHLGYSTTWGMFSGFEGEIMFDQEDPANSSVSVSMPVKSMFT
GWEGRFNHFMSDDFFGATDDEMVSFTSTAIEVTGEDTAKITGDLTLNGVTKSVVLDAKLNKVGEHPMAKKPWAGFDATTT
LVRSEYELGQFAPFVSDEVEVQISVEAMKAE
>Mature_191_residues
MKKILLAAALIGTTATTAFAAPEKYTLDASHSQILFNYNHLGYSTTWGMFSGFEGEIMFDQEDPANSSVSVSMPVKSMFT
GWEGRFNHFMSDDFFGATDDEMVSFTSTAIEVTGEDTAKITGDLTLNGVTKSVVLDAKLNKVGEHPMAKKPWAGFDATTT
LVRSEYELGQFAPFVSDEVEVQISVEAMKAE

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=193, Percent_Identity=37.3056994818653, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 20841; Mature: 20841

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLAAALIGTTATTAFAAPEKYTLDASHSQILFNYNHLGYSTTWGMFSGFEGEIMFD
CCHHHEEHHHHCCCCHHEECCCCCEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEC
QEDPANSSVSVSMPVKSMFTGWEGRFNHFMSDDFFGATDDEMVSFTSTAIEVTGEDTAKI
CCCCCCCEEEEEECHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEE
TGDLTLNGVTKSVVLDAKLNKVGEHPMAKKPWAGFDATTTLVRSEYELGQFAPFVSDEVE
EEEEEECCCEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
VQISVEAMKAE
EEEEEEEEECC
>Mature Secondary Structure
MKKILLAAALIGTTATTAFAAPEKYTLDASHSQILFNYNHLGYSTTWGMFSGFEGEIMFD
CCHHHEEHHHHCCCCHHEECCCCCEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEC
QEDPANSSVSVSMPVKSMFTGWEGRFNHFMSDDFFGATDDEMVSFTSTAIEVTGEDTAKI
CCCCCCCEEEEEECHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEE
TGDLTLNGVTKSVVLDAKLNKVGEHPMAKKPWAGFDATTTLVRSEYELGQFAPFVSDEVE
EEEEEECCCEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
VQISVEAMKAE
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA