Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080875
Identifier: 99080875
GI number: 99080875
Start: 1114264
End: 1114497
Strand: Direct
Name: 99080875
Synonym: TM1040_1034
Alternate gene names: NA
Gene position: 1114264-1114497 (Clockwise)
Preceding gene: 99080874
Following gene: 99080876
Centisome position: 34.81
GC content: 51.28
Gene sequence:
>234_bases ATGCCCGCGTGCATGCCCGACTGGAGGGAGCTCCAAATTCCCTTGGCAGAAAGGAAAGTTTCCGTTTCTACTCTTGCGTG CTATCGGATTGTGCGCAGCGATCCTGTCTATCGGTCCCGGGCTGGCTTAGGGGGAGAAGCCAAAGATTTTTCCCTCGCGA TTGTCTTTGATGCAGACTTCATTTTTGCCCGCGGAAAATTCATTAAGTTTGGAAATTCGAAAGCCTTGGGGTGA
Upstream 100 bases:
>100_bases GAAAAATATAGCGCGCGTCAAAGACCGAGCGCACGGCAGAGGCTTGCAACTTGAGAGGGTGACTCAATCAGGCCAGGGTT GCGGAGCCTACGCGACAGCG
Downstream 100 bases:
>100_bases CTCGTTGCCTCGCCGTGGTCATAGGACGGACAAATGGCAGCACAGACCGCACGCACGCGCGTTGATTTCTACCTCGGAGC CTGTTTGGCCGTGGTCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPACMPDWRELQIPLAERKVSVSTLACYRIVRSDPVYRSRAGLGGEAKDFSLAIVFDADFIFARGKFIKFGNSKALG
Sequences:
>Translated_77_residues MPACMPDWRELQIPLAERKVSVSTLACYRIVRSDPVYRSRAGLGGEAKDFSLAIVFDADFIFARGKFIKFGNSKALG >Mature_76_residues PACMPDWRELQIPLAERKVSVSTLACYRIVRSDPVYRSRAGLGGEAKDFSLAIVFDADFIFARGKFIKFGNSKALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8556; Mature: 8425
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPACMPDWRELQIPLAERKVSVSTLACYRIVRSDPVYRSRAGLGGEAKDFSLAIVFDADF CCCCCCCCCEEECCHHHCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCE IFARGKFIKFGNSKALG EEECCEEEEECCCCCCC >Mature Secondary Structure PACMPDWRELQIPLAERKVSVSTLACYRIVRSDPVYRSRAGLGGEAKDFSLAIVFDADF CCCCCCCCEEECCHHHCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCE IFARGKFIKFGNSKALG EEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA