The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080858

Identifier: 99080858

GI number: 99080858

Start: 1088369

End: 1089136

Strand: Direct

Name: 99080858

Synonym: TM1040_1017

Alternate gene names: NA

Gene position: 1088369-1089136 (Clockwise)

Preceding gene: 99080856

Following gene: 99080862

Centisome position: 34.0

GC content: 62.37

Gene sequence:

>768_bases
ATGACTGAGATTCTCCACCGCACCCTGCCATATCATCCGATGACACCGCGCCCGCTGCCCGGTATTGAGCCGCTTGCGCC
CGAGGACTGGCTGCGCTTTGACGAGGGGTTTGCCCCCCAGATGCAGGAGCGCACGCGTCTGTTGCGCGATCATGCGGATG
CCGTGCTGGCAATGGCCCCCGAGGCGGAGCCTGCCGCACAGGAGCTGCTCGATCATGTGCTTGCAGCGCGCTATGGCGCG
GGGCGACAGGTGCAGCGGATCACGCGCCCGGATGGGATTGAGGTGGCACTCAATCGTGCCGCCCCGATGGAGACCCTGGG
CCACATCGCGCAGCAGGATTTCTGTATTCTTGAAAAGCCCGAAGGCAGCACCGAGCATATCCTGACAGCCGCGGTTTTGT
GTTTTCCCGCCAGTTGGACCCTCTCGGAGAAGGTCATGAAACCACTGCTGGCGATCCACGCTCCGGTGCAGGACTATGAC
AGCGGGATTGCACGGCGGGTGCAGCGATTGTTTGACGGTGTGCAGGCAGGTCGGCCGCTCTGGCGCTTTAATGCACTGTG
GTATGCGGATCCGAGCCTGCATCAGCCACGTTTGGAACAGGATCCACGCCCAACGTCGACGCCAGAGACCCGCGCCTATC
TACGCAGCGAATTGCAGTCTATTTATCGGCTGCCCCAGACCAGAGCGGTGGTGTTCTCGATCCACACGCAGGTGCTTGCC
CGCGCGGATGTGCTCAGCCAGTGGGGAGACGAGAAAACCCCGCAATAG

Upstream 100 bases:

>100_bases
ATTTTGGCGAATTTGGATGGAAAATGCCGGTACTACCCTCTGAAACTGTCCAGAACTGTACAGTGGTAGACAGATTTGGT
CGGGCTGCTATGGCTATGCG

Downstream 100 bases:

>100_bases
GCTGATATTGCGGGGCTTATATGTCCATTTTTGCGCGTCAGTTGACAGCGGCGTTCAACAGTACCGTTGATTCAAGGAAC
ACCAACACCGCAAGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTEILHRTLPYHPMTPRPLPGIEPLAPEDWLRFDEGFAPQMQERTRLLRDHADAVLAMAPEAEPAAQELLDHVLAARYGA
GRQVQRITRPDGIEVALNRAAPMETLGHIAQQDFCILEKPEGSTEHILTAAVLCFPASWTLSEKVMKPLLAIHAPVQDYD
SGIARRVQRLFDGVQAGRPLWRFNALWYADPSLHQPRLEQDPRPTSTPETRAYLRSELQSIYRLPQTRAVVFSIHTQVLA
RADVLSQWGDEKTPQ

Sequences:

>Translated_255_residues
MTEILHRTLPYHPMTPRPLPGIEPLAPEDWLRFDEGFAPQMQERTRLLRDHADAVLAMAPEAEPAAQELLDHVLAARYGA
GRQVQRITRPDGIEVALNRAAPMETLGHIAQQDFCILEKPEGSTEHILTAAVLCFPASWTLSEKVMKPLLAIHAPVQDYD
SGIARRVQRLFDGVQAGRPLWRFNALWYADPSLHQPRLEQDPRPTSTPETRAYLRSELQSIYRLPQTRAVVFSIHTQVLA
RADVLSQWGDEKTPQ
>Mature_254_residues
TEILHRTLPYHPMTPRPLPGIEPLAPEDWLRFDEGFAPQMQERTRLLRDHADAVLAMAPEAEPAAQELLDHVLAARYGAG
RQVQRITRPDGIEVALNRAAPMETLGHIAQQDFCILEKPEGSTEHILTAAVLCFPASWTLSEKVMKPLLAIHAPVQDYDS
GIARRVQRLFDGVQAGRPLWRFNALWYADPSLHQPRLEQDPRPTSTPETRAYLRSELQSIYRLPQTRAVVFSIHTQVLAR
ADVLSQWGDEKTPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28855; Mature: 28724

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILHRTLPYHPMTPRPLPGIEPLAPEDWLRFDEGFAPQMQERTRLLRDHADAVLAMAP
CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
EAEPAAQELLDHVLAARYGAGRQVQRITRPDGIEVALNRAAPMETLGHIAQQDFCILEKP
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECC
EGSTEHILTAAVLCFPASWTLSEKVMKPLLAIHAPVQDYDSGIARRVQRLFDGVQAGRPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCE
WRFNALWYADPSLHQPRLEQDPRPTSTPETRAYLRSELQSIYRLPQTRAVVFSIHTQVLA
EHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RADVLSQWGDEKTPQ
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEILHRTLPYHPMTPRPLPGIEPLAPEDWLRFDEGFAPQMQERTRLLRDHADAVLAMAP
CHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
EAEPAAQELLDHVLAARYGAGRQVQRITRPDGIEVALNRAAPMETLGHIAQQDFCILEKP
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECC
EGSTEHILTAAVLCFPASWTLSEKVMKPLLAIHAPVQDYDSGIARRVQRLFDGVQAGRPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCE
WRFNALWYADPSLHQPRLEQDPRPTSTPETRAYLRSELQSIYRLPQTRAVVFSIHTQVLA
EHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RADVLSQWGDEKTPQ
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA