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The map label for this gene is 99080851

Identifier: 99080851

GI number: 99080851

Start: 1081470

End: 1082015

Strand: Reverse

Name: 99080851

Synonym: TM1040_1010

Alternate gene names: NA

Gene position: 1082015-1081470 (Counterclockwise)

Preceding gene: 99080852

Following gene: 99080850

Centisome position: 33.8

GC content: 58.24

Gene sequence:

>546_bases
ATGCGTTTCACGGCCCTCGCGCTTGCACTTGCCCTACCCCTCTCTCTGCCGGTTGCGGGACTTGCCGCAGGTGGGGATAC
CACCACGCCGCCAAAGCCCTCCGACACCACCAAGGAATGCTGGGGCAAACGGGTCTGGGATGACGAGGCCAAGAAATGCG
TCAAACCCGAAGAATCATCCCTCAATGGCCAAGAGCTCCTGGAGACCGCGCGCGAGCTCGCCTATCTCGAACGCTTTGAC
GATGCGCAGGCTGTACTGGCCGCGCACCCCGTGCAGACGGATAGCAGGGTTATGACCTATTGGGGCTTCACACATCGCAA
ATTGGGCCGCAGCGATATTGCTTTGGACTATTACACCCGCGCAATTGCGCAGAACCCCGACAATATTCTTGCCCGCAGTT
ATATGGCGCAAGGCTTTGTAGAGACGGGAGAATATGCCAAGGCACTGGCAGAATGGAAGGAAATCAAGGCCCGCGGCGGC
GAAGGCACATGGGCTGAAACCTCGCTCCGGCATGCAATTCAGACGGGTGTCACGGTTAACTACTAA

Upstream 100 bases:

>100_bases
CGGGGTTTTTCTTTTACCCCCTCACAGCTTCGTGAAAACAAAATTTGGACGATCCGCGCGTTTTCAACGTAATTTGTGCA
ACAACAGATAGGAGATCTTC

Downstream 100 bases:

>100_bases
GCTTCAGGCTTTCTTTACGGCTGAAGGTTTATCTTGTGACCTGACAGAAAGAGAATCTTTTCGGGTCAAGGTTCAAGAAT
GGAACAATCATCAGCCTTAG

Product: tetratricopeptide TPR_2

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRFTALALALALPLSLPVAGLAAGGDTTTPPKPSDTTKECWGKRVWDDEAKKCVKPEESSLNGQELLETARELAYLERFD
DAQAVLAAHPVQTDSRVMTYWGFTHRKLGRSDIALDYYTRAIAQNPDNILARSYMAQGFVETGEYAKALAEWKEIKARGG
EGTWAETSLRHAIQTGVTVNY

Sequences:

>Translated_181_residues
MRFTALALALALPLSLPVAGLAAGGDTTTPPKPSDTTKECWGKRVWDDEAKKCVKPEESSLNGQELLETARELAYLERFD
DAQAVLAAHPVQTDSRVMTYWGFTHRKLGRSDIALDYYTRAIAQNPDNILARSYMAQGFVETGEYAKALAEWKEIKARGG
EGTWAETSLRHAIQTGVTVNY
>Mature_181_residues
MRFTALALALALPLSLPVAGLAAGGDTTTPPKPSDTTKECWGKRVWDDEAKKCVKPEESSLNGQELLETARELAYLERFD
DAQAVLAAHPVQTDSRVMTYWGFTHRKLGRSDIALDYYTRAIAQNPDNILARSYMAQGFVETGEYAKALAEWKEIKARGG
EGTWAETSLRHAIQTGVTVNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19980; Mature: 19980

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTALALALALPLSLPVAGLAAGGDTTTPPKPSDTTKECWGKRVWDDEAKKCVKPEESS
CCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCC
LNGQELLETARELAYLERFDDAQAVLAAHPVQTDSRVMTYWGFTHRKLGRSDIALDYYTR
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEHHCCHHHHCCCCHHHHHHHHH
AIAQNPDNILARSYMAQGFVETGEYAKALAEWKEIKARGGEGTWAETSLRHAIQTGVTVN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEC
Y
C
>Mature Secondary Structure
MRFTALALALALPLSLPVAGLAAGGDTTTPPKPSDTTKECWGKRVWDDEAKKCVKPEESS
CCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCC
LNGQELLETARELAYLERFDDAQAVLAAHPVQTDSRVMTYWGFTHRKLGRSDIALDYYTR
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEHHCCHHHHCCCCHHHHHHHHH
AIAQNPDNILARSYMAQGFVETGEYAKALAEWKEIKARGGEGTWAETSLRHAIQTGVTVN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA