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The map label for this gene is 99080792

Identifier: 99080792

GI number: 99080792

Start: 1015957

End: 1016421

Strand: Direct

Name: 99080792

Synonym: TM1040_0951

Alternate gene names: NA

Gene position: 1015957-1016421 (Clockwise)

Preceding gene: 99080791

Following gene: 99080796

Centisome position: 31.74

GC content: 63.66

Gene sequence:

>465_bases
ATGGGGGCCGCCTACTTCTACCATCTGACGCGCAAGCCCTTGCAGGAAACGCTTCCCGTGCTTCTTGACAAGGCGCGCGG
CGCGGGCTGGCGAATTGCCGTGCGCGGCCGCGATCCCGAGCGGCTGGCGTGGCTCGATGATACGCTTTGGCTTGCGGGGG
ATGCGTCCTTTCTGCCCCACGGCATTGCAGGCGGCCCTCATGATGCGCTGCAACCGATCCTGCTCACCACTGCGTCGGAG
GCTGCTAATGGCGCCGATTGCGTGATGTCCGTGGATGGTGCTGAGGTGCAGCCAGACGAGGTGGACGCGCTGGAGCGGGT
CTGCATCCTCTTTGATGGCACAGACCCCGAGGCCGTGCAGCATGCGCGCGGGCAATGGAAAAACCTCACTGCGGCAGGTT
GCTTGGCACAGTATTGGTCCGAGGAAAGCGGTCGCTGGGAAAAAAAGGCTGAAAGCGGAGGCTGA

Upstream 100 bases:

>100_bases
CAAGGCGGCAACGGACTATGCGCCCAAAGGGGCGACCGGCTGGGGGGTGATGGCACTCAACCGTCTGGTGCAAGATCAGT
TCGAGGCCGAGTAACGCGCA

Downstream 100 bases:

>100_bases
GGGGCGCTGCCCCTCTTGGCCTGCGGCCAATTCACCCCGGGATACTTGGCGTTAGAAGAACGCAAGATCCGCGGCGCCGA
AGGATTTCGTTAACCGAGAT

Product: DNA polymerase III subunit chi

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Superfamily; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGAAYFYHLTRKPLQETLPVLLDKARGAGWRIAVRGRDPERLAWLDDTLWLAGDASFLPHGIAGGPHDALQPILLTTASE
AANGADCVMSVDGAEVQPDEVDALERVCILFDGTDPEAVQHARGQWKNLTAAGCLAQYWSEESGRWEKKAESGG

Sequences:

>Translated_154_residues
MGAAYFYHLTRKPLQETLPVLLDKARGAGWRIAVRGRDPERLAWLDDTLWLAGDASFLPHGIAGGPHDALQPILLTTASE
AANGADCVMSVDGAEVQPDEVDALERVCILFDGTDPEAVQHARGQWKNLTAAGCLAQYWSEESGRWEKKAESGG
>Mature_153_residues
GAAYFYHLTRKPLQETLPVLLDKARGAGWRIAVRGRDPERLAWLDDTLWLAGDASFLPHGIAGGPHDALQPILLTTASEA
ANGADCVMSVDGAEVQPDEVDALERVCILFDGTDPEAVQHARGQWKNLTAAGCLAQYWSEESGRWEKKAESGG

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 16685; Mature: 16554

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAYFYHLTRKPLQETLPVLLDKARGAGWRIAVRGRDPERLAWLDDTLWLAGDASFLPH
CCCEEEEHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCEEECCCCCCCCC
GIAGGPHDALQPILLTTASEAANGADCVMSVDGAEVQPDEVDALERVCILFDGTDPEAVQ
CCCCCCHHHHCHHHEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHEEEEECCCCHHHHH
HARGQWKNLTAAGCLAQYWSEESGRWEKKAESGG
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GAAYFYHLTRKPLQETLPVLLDKARGAGWRIAVRGRDPERLAWLDDTLWLAGDASFLPH
CCEEEEHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCEEECCCCCCCCC
GIAGGPHDALQPILLTTASEAANGADCVMSVDGAEVQPDEVDALERVCILFDGTDPEAVQ
CCCCCCHHHHCHHHEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHEEEEECCCCHHHHH
HARGQWKNLTAAGCLAQYWSEESGRWEKKAESGG
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA