| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is mazG [H]
Identifier: 99080777
GI number: 99080777
Start: 999002
End: 999844
Strand: Reverse
Name: mazG [H]
Synonym: TM1040_0936
Alternate gene names: 99080777
Gene position: 999844-999002 (Counterclockwise)
Preceding gene: 99080781
Following gene: 99080775
Centisome position: 31.24
GC content: 60.74
Gene sequence:
>843_bases ATGAGCGACGACAGCTTGATCCACGATGAAACCGCAGGCATCGAACGGCTCCTGGAAATCATGCGCCGCCTGCGCGATCC AAAGGGCGGCTGCCCTTGGGACATCGAGCAGGATTTTGCCTCCATCGCGCCCTACACCATCGAAGAGGCCTATGAGGTCG CCGACGCCATCGAGCGTGAGAAATGGGACGAACTGAAGGGTGAGTTGGGCGATCTCTTGTTCCAATCCGTCTTTCACGCA CAAATGGCTGCCGAAGCCGGGCATTTCACCTTTCAGGATGTGGTCACAACCATGTCCAACAAGATGGTGTCGCGGCACCC GCATGTTTTTGGCGACGAGAGCCGCGAGAAATCCGCCGAACAGCAAACGCAGGACTGGGAGACCATCAAGGCCGCCGAGC GCGCCGCAAAGGCCGAGACTGGCGCGCTGGATGGTGTCGCGGTGGGCCTGCCGGCCTTGCTGCGCGCCTACAAGCTGCAA AAACGCGCGGCGCGGGTGGGGTTTGACTGGCCCTCGGCACAGAATGTGCTCGCCAAGATTGCCGAGGAATCCGCCGAACT CGTCGAGGCGCGCGACACGCTCACTCAGGATGAGGTCGAAGAAGAATTCGGCGATCTTCTGTTTGTGATGGCCAACCTCG GTCGCCACCTCGGCGTCGAACCTGAGGCGGCCCTGCGCCGCACCAACGCGAAATTCACCCGCCGCTTCAAGGCGGTAGAG GCAAAGCTGGCAGAACGGGGCAAGCGCGCCGAAGACAGCAACCTTGAGGAAATGGACGCGCTTTGGAACGCGGTCAAAGC CGAGGAAAAAGCGCGCAAGGGCCAAGACTCTAAATCAGAGTAA
Upstream 100 bases:
>100_bases TCTTCGGCAAAATCAGCGATGCGGTTCACGACCGGCATGGGGTGGACTCCTGTCAAATAGTCGGGATGATGCAGCAGACA CGAAAACGCAGGCAGGTGCA
Downstream 100 bases:
>100_bases GCCCCGGTTCCTTGGCGATATCTGACAGATCGCGCTCGTAGCGCATTGAGAAGGCGCGCAATTCTCGCGGTGTAAACTCA GTGAGCCCCATGGGTGTCGC
Product: nucleoside triphosphate pyrophosphohydrolase
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSDDSLIHDETAGIERLLEIMRRLRDPKGGCPWDIEQDFASIAPYTIEEAYEVADAIEREKWDELKGELGDLLFQSVFHA QMAAEAGHFTFQDVVTTMSNKMVSRHPHVFGDESREKSAEQQTQDWETIKAAERAAKAETGALDGVAVGLPALLRAYKLQ KRAARVGFDWPSAQNVLAKIAEESAELVEARDTLTQDEVEEEFGDLLFVMANLGRHLGVEPEAALRRTNAKFTRRFKAVE AKLAERGKRAEDSNLEEMDALWNAVKAEEKARKGQDSKSE
Sequences:
>Translated_280_residues MSDDSLIHDETAGIERLLEIMRRLRDPKGGCPWDIEQDFASIAPYTIEEAYEVADAIEREKWDELKGELGDLLFQSVFHA QMAAEAGHFTFQDVVTTMSNKMVSRHPHVFGDESREKSAEQQTQDWETIKAAERAAKAETGALDGVAVGLPALLRAYKLQ KRAARVGFDWPSAQNVLAKIAEESAELVEARDTLTQDEVEEEFGDLLFVMANLGRHLGVEPEAALRRTNAKFTRRFKAVE AKLAERGKRAEDSNLEEMDALWNAVKAEEKARKGQDSKSE >Mature_279_residues SDDSLIHDETAGIERLLEIMRRLRDPKGGCPWDIEQDFASIAPYTIEEAYEVADAIEREKWDELKGELGDLLFQSVFHAQ MAAEAGHFTFQDVVTTMSNKMVSRHPHVFGDESREKSAEQQTQDWETIKAAERAAKAETGALDGVAVGLPALLRAYKLQK RAARVGFDWPSAQNVLAKIAEESAELVEARDTLTQDEVEEEFGDLLFVMANLGRHLGVEPEAALRRTNAKFTRRFKAVEA KLAERGKRAEDSNLEEMDALWNAVKAEEKARKGQDSKSE
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=258, Percent_Identity=55.0387596899225, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 31407; Mature: 31276
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSLIHDETAGIERLLEIMRRLRDPKGGCPWDIEQDFASIAPYTIEEAYEVADAIERE CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH KWDELKGELGDLLFQSVFHAQMAAEAGHFTFQDVVTTMSNKMVSRHPHVFGDESREKSAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QQTQDWETIKAAERAAKAETGALDGVAVGLPALLRAYKLQKRAARVGFDWPSAQNVLAKI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEESAELVEARDTLTQDEVEEEFGDLLFVMANLGRHLGVEPEAALRRTNAKFTRRFKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AKLAERGKRAEDSNLEEMDALWNAVKAEEKARKGQDSKSE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDDSLIHDETAGIERLLEIMRRLRDPKGGCPWDIEQDFASIAPYTIEEAYEVADAIERE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH KWDELKGELGDLLFQSVFHAQMAAEAGHFTFQDVVTTMSNKMVSRHPHVFGDESREKSAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QQTQDWETIKAAERAAKAETGALDGVAVGLPALLRAYKLQKRAARVGFDWPSAQNVLAKI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEESAELVEARDTLTQDEVEEEFGDLLFVMANLGRHLGVEPEAALRRTNAKFTRRFKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AKLAERGKRAEDSNLEEMDALWNAVKAEEKARKGQDSKSE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]