Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080781

Identifier: 99080781

GI number: 99080781

Start: 1003342

End: 1003671

Strand: Reverse

Name: 99080781

Synonym: TM1040_0940

Alternate gene names: NA

Gene position: 1003671-1003342 (Counterclockwise)

Preceding gene: 99080785

Following gene: 99080777

Centisome position: 31.36

GC content: 63.33

Gene sequence:

>330_bases
ATGAAACATGCCAGTGGTCTTGTCCGATTTGCTGCCCGCGCCGCACATACGGCGGCTGTAGCGGTGAGCCTGCTGATTGT
GGCAACGGGGGGTGGCGCCCACGCGGATGTCGTCGGCCCCGGCGGCAAGACCATAGATTGCTATTGCACCGACAAACAGG
GCGCGCGGATTGAGCTTGGGGAAACCATCTGCCTGCAGGTGGATGGGCGCCTGTTCATGGCGCAGTGCCAGATGTCGCTC
AACGTACCCATGTGGCGTGAGGTTCAGGAGGGCTGCCTTTCGGCCTCAAACCACCTGAGCCCGCTGCCCGCGGTGATGCC
GCGCCTTTAG

Upstream 100 bases:

>100_bases
TCTGTTGCAGCCGGTCTTCGGGGATCATGTCTTGGCGTGTCTCACTGTTGGGCGCGCGTCAGGCTTTGGCGCGGGGCTGC
ATTTGTGATAGGCTAGAGGC

Downstream 100 bases:

>100_bases
GATCGCTCGCAACACCTGTCAGGGCGCCCCGGGGCACGCGCGCAGATTCCCCAAGCCATTGCTTCCGAGAAAACCAGCGT
CACGGCCTGCAAGCCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKHASGLVRFAARAAHTAAVAVSLLIVATGGGAHADVVGPGGKTIDCYCTDKQGARIELGETICLQVDGRLFMAQCQMSL
NVPMWREVQEGCLSASNHLSPLPAVMPRL

Sequences:

>Translated_109_residues
MKHASGLVRFAARAAHTAAVAVSLLIVATGGGAHADVVGPGGKTIDCYCTDKQGARIELGETICLQVDGRLFMAQCQMSL
NVPMWREVQEGCLSASNHLSPLPAVMPRL
>Mature_109_residues
MKHASGLVRFAARAAHTAAVAVSLLIVATGGGAHADVVGPGGKTIDCYCTDKQGARIELGETICLQVDGRLFMAQCQMSL
NVPMWREVQEGCLSASNHLSPLPAVMPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11446; Mature: 11446

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHASGLVRFAARAAHTAAVAVSLLIVATGGGAHADVVGPGGKTIDCYCTDKQGARIELG
CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCEEECC
ETICLQVDGRLFMAQCQMSLNVPMWREVQEGCLSASNHLSPLPAVMPRL
CEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKHASGLVRFAARAAHTAAVAVSLLIVATGGGAHADVVGPGGKTIDCYCTDKQGARIELG
CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCEEECC
ETICLQVDGRLFMAQCQMSLNVPMWREVQEGCLSASNHLSPLPAVMPRL
CEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA