| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is anmK
Identifier: 99080765
GI number: 99080765
Start: 986286
End: 987413
Strand: Direct
Name: anmK
Synonym: TM1040_0924
Alternate gene names: 99080765
Gene position: 986286-987413 (Clockwise)
Preceding gene: 99080761
Following gene: 99080767
Centisome position: 30.81
GC content: 65.07
Gene sequence:
>1128_bases ATGGGCAGAGCCATATCCAAGTCAGGCCCGGTGCGGGCCTTGGGCGCCATGAGCGGGACATCGCTTGACGGGGTCGACGT CGCAGTTCTGGAAACCGACGGGCGCGACATTCTCGGCTTTGGAGAGACGGGCTACCGCGCCTATTCGGACGCGGAGCGGG AGGTGTTGCGGGCCGCGCTGGGCCAGTGGACCGGCGATGCAGTCGCGGCGGCGGCGCGGGTGGTCGAGGCGGCGCATATC GAGGTGATGACGGACCACGCCGATGTGGATCTCATCGGTTTTCATGGCCAGACCGTTGCACATGCCCCGCGTCTTCAGGG CACGTTGCAGGTTGGCGATGGTGGTGTGCTGGCCGAGGCCTTGGGGCGGCCTGTGGTCTGGGACTTTCGCTCTGATGATG TGTCGATGGGCGGCGAGGGCGCACCGCTCGCGCCTTTCTTCCATCATGCCTGCGCGCGCTATATCGGCGCGACAGAGCCC TTGTGTTTTCTGAACCTCGGCGGGGTCGGCAACGTGACCTATGTTGATCCCCGCAAGGCCCGGCCCGAAGACGAAGGGGC GCTTCTGGCGTTCGATACCGGGCCTGCCAATGCGCCGATCAACGACTTTCTTCAGTCCCGTCTCGGTCTTGCGATGGACG AAGGCGGTAGGATTGCATCCGGGGGCGCGGTGGAAAACGGCGCGCTGGAGCTGTTTCTCGCCGAGCCCTATTTTGCGCGG ATGCCACCCAAATCTCTGGATCGAAACGATTTCCCCGAGATGATCGGACTCGTGACCGAGCTCAGCGATGCGGATGCCAC CGCGACACTTACCGCCATGTGTGCTGCAGCCGTGGCGCAAGGCATGGAGCATTGTCCCAAGGCACCGTCAAAGGTGCTTG TCACCGGCGGTGGGCGGCACAATCCGGTGCTGATGGAAATGCTGCGGGTGTCGCTTGATTGCCCGGTAGAGCCGGTGGAA ACGGTGGGGCTCGATGGGGACATGTTGGAAGCGCAGGCGTTTGCCTACCTCGCGGTCAGGGTGGCGCGCGGCCTTCCGAC CTCAGCGCCCAGCACGACCGGCGTGCGCGCCTGCGTCGGCGGCGGGACGGTGACCGTTCCCGAAGGATGGACAGCGCGCA AAACCTGA
Upstream 100 bases:
>100_bases CATCGACACCGGTGGGAACCTGTTTTCGGGACAAAATGTGCGGTGTATCATGTGCCGCAACGGGCGGGACGGCCCGGTTT TCGCAAGGAAGAGTGCAGAG
Downstream 100 bases:
>100_bases TCGTTTAACTTCGGGGTATACCTGCAATTAGTTTGGCGGGCCAGCTCCCGCCCGTCGCGGGCTGCATATGAAATGCACCC GCTCCCGATGGGCCAGGCGC
Product: anhydro-N-acetylmuramic acid kinase
Products: NA
Alternate protein names: AnhMurNAc kinase
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGRAISKSGPVRALGAMSGTSLDGVDVAVLETDGRDILGFGETGYRAYSDAEREVLRAALGQWTGDAVAAAARVVEAAHI EVMTDHADVDLIGFHGQTVAHAPRLQGTLQVGDGGVLAEALGRPVVWDFRSDDVSMGGEGAPLAPFFHHACARYIGATEP LCFLNLGGVGNVTYVDPRKARPEDEGALLAFDTGPANAPINDFLQSRLGLAMDEGGRIASGGAVENGALELFLAEPYFAR MPPKSLDRNDFPEMIGLVTELSDADATATLTAMCAAAVAQGMEHCPKAPSKVLVTGGGRHNPVLMEMLRVSLDCPVEPVE TVGLDGDMLEAQAFAYLAVRVARGLPTSAPSTTGVRACVGGGTVTVPEGWTARKT
Sequences:
>Translated_375_residues MGRAISKSGPVRALGAMSGTSLDGVDVAVLETDGRDILGFGETGYRAYSDAEREVLRAALGQWTGDAVAAAARVVEAAHI EVMTDHADVDLIGFHGQTVAHAPRLQGTLQVGDGGVLAEALGRPVVWDFRSDDVSMGGEGAPLAPFFHHACARYIGATEP LCFLNLGGVGNVTYVDPRKARPEDEGALLAFDTGPANAPINDFLQSRLGLAMDEGGRIASGGAVENGALELFLAEPYFAR MPPKSLDRNDFPEMIGLVTELSDADATATLTAMCAAAVAQGMEHCPKAPSKVLVTGGGRHNPVLMEMLRVSLDCPVEPVE TVGLDGDMLEAQAFAYLAVRVARGLPTSAPSTTGVRACVGGGTVTVPEGWTARKT >Mature_374_residues GRAISKSGPVRALGAMSGTSLDGVDVAVLETDGRDILGFGETGYRAYSDAEREVLRAALGQWTGDAVAAAARVVEAAHIE VMTDHADVDLIGFHGQTVAHAPRLQGTLQVGDGGVLAEALGRPVVWDFRSDDVSMGGEGAPLAPFFHHACARYIGATEPL CFLNLGGVGNVTYVDPRKARPEDEGALLAFDTGPANAPINDFLQSRLGLAMDEGGRIASGGAVENGALELFLAEPYFARM PPKSLDRNDFPEMIGLVTELSDADATATLTAMCAAAVAQGMEHCPKAPSKVLVTGGGRHNPVLMEMLRVSLDCPVEPVET VGLDGDMLEAQAFAYLAVRVARGLPTSAPSTTGVRACVGGGTVTVPEGWTARKT
Specific function: Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived
COG id: COG2377
COG function: function code O; Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anhydro-N-acetylmuramic acid kinase family
Homologues:
Organism=Escherichia coli, GI1787928, Length=372, Percent_Identity=33.0645161290323, Blast_Score=145, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ANMK_SILST (Q1GI59)
Other databases:
- EMBL: CP000377 - RefSeq: YP_612919.1 - ProteinModelPortal: Q1GI59 - SMR: Q1GI59 - STRING: Q1GI59 - GeneID: 4077552 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_0924 - NMPDR: fig|292414.1.peg.3004 - eggNOG: COG2377 - HOGENOM: HBG324434 - OMA: GSHGQTV - PhylomeDB: Q1GI59 - ProtClustDB: PRK09585 - BioCyc: SSP292414:TM1040_0924-MONOMER - HAMAP: MF_01270 - InterPro: IPR005338
Pfam domain/function: PF03702 UPF0075
EC number: NA
Molecular weight: Translated: 39012; Mature: 38880
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAISKSGPVRALGAMSGTSLDGVDVAVLETDGRDILGFGETGYRAYSDAEREVLRAAL CCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH GQWTGDAVAAAARVVEAAHIEVMTDHADVDLIGFHGQTVAHAPRLQGTLQVGDGGVLAEA CCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCHHCCCCCCEEEEECCCCHHHHH LGRPVVWDFRSDDVSMGGEGAPLAPFFHHACARYIGATEPLCFLNLGGVGNVTYVDPRKA HCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCC RPEDEGALLAFDTGPANAPINDFLQSRLGLAMDEGGRIASGGAVENGALELFLAEPYFAR CCCCCCCEEEEECCCCCCCHHHHHHHHHCCEECCCCEEECCCCCCCCCEEEEEECCHHHC MPPKSLDRNDFPEMIGLVTELSDADATATLTAMCAAAVAQGMEHCPKAPSKVLVTGGGRH CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC NPVLMEMLRVSLDCPVEPVETVGLDGDMLEAQAFAYLAVRVARGLPTSAPSTTGVRACVG CHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC GGTVTVPEGWTARKT CCEEECCCCCCCCCC >Mature Secondary Structure GRAISKSGPVRALGAMSGTSLDGVDVAVLETDGRDILGFGETGYRAYSDAEREVLRAAL CCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH GQWTGDAVAAAARVVEAAHIEVMTDHADVDLIGFHGQTVAHAPRLQGTLQVGDGGVLAEA CCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCHHCCCCCCEEEEECCCCHHHHH LGRPVVWDFRSDDVSMGGEGAPLAPFFHHACARYIGATEPLCFLNLGGVGNVTYVDPRKA HCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCC RPEDEGALLAFDTGPANAPINDFLQSRLGLAMDEGGRIASGGAVENGALELFLAEPYFAR CCCCCCCEEEEECCCCCCCHHHHHHHHHCCEECCCCEEECCCCCCCCCEEEEEECCHHHC MPPKSLDRNDFPEMIGLVTELSDADATATLTAMCAAAVAQGMEHCPKAPSKVLVTGGGRH CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC NPVLMEMLRVSLDCPVEPVETVGLDGDMLEAQAFAYLAVRVARGLPTSAPSTTGVRACVG CHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC GGTVTVPEGWTARKT CCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA