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The map label for this gene is 99080759

Identifier: 99080759

GI number: 99080759

Start: 979301

End: 979768

Strand: Direct

Name: 99080759

Synonym: TM1040_0918

Alternate gene names: NA

Gene position: 979301-979768 (Clockwise)

Preceding gene: 99080751

Following gene: 99080760

Centisome position: 30.59

GC content: 60.04

Gene sequence:

>468_bases
ATGATTGCAAGTCCGAAGACCGTAAAATCCGCAATGCGGAGCGCGCTTCTCGTTGGGGTGTTGGTGGCGGTCACCGCCTG
CACGGCCCAATACCGCAAGCATGGCTGGGTCCCCGGACCTGATCTTCTCAACGAAGTTGTGGTCGGTGTCGACACGCGTG
ATTCGGTTTCAGAGACCATCGGCGAGCCCACCATCGACTCGCTGGTGGACGACAGCGGCTATTATTATGTCAGCTCGCGC
ATCAAACGCTTTGGCCCCAAAGAGCCGGAGGTTGTCTCGCGCGATCTCGTGGCGATCACCTTTGATGGGCGCGGCGTTGT
CGACAGCGTGCAGCGCTACACACTGGCGGATGGACGCGCCGTCCCGCTCGAGCGCCGCGTCACCGACTCGAATCTCGAGG
ACAAGACGTTCCTGCGCCAGTTGATCGGCAACCTTGGCAACTTCAACCCAAGCAGCTTCCTGCAATAA

Upstream 100 bases:

>100_bases
GGGGTGGAACTCACGAGCGTACTTTCATTTCTTGAACCATTAGCTCGAGTTAGGTAATCGGGACTTCAGTCTTTATCAAC
CCGAACCGCAGGGGAAGCGC

Downstream 100 bases:

>100_bases
CGTCGGTAGCGGTCGCTCCGAGGAGCGGCTAGCAGTCTAAAAGTGGCCCGGGGGATGAATTCGTCACCCGGGTTACACAT
GTTTTGTGCTAGCAAGAGCC

Product: SmpA/OmlA family lipoprotein

Products: NA

Alternate protein names: SmpA/OmlA Domain-Containing Protein; SmpA/OmlA Family Lipoprotein; SmpA/OmlA; Lipoprotein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIASPKTVKSAMRSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETIGEPTIDSLVDDSGYYYVSSR
IKRFGPKEPEVVSRDLVAITFDGRGVVDSVQRYTLADGRAVPLERRVTDSNLEDKTFLRQLIGNLGNFNPSSFLQ

Sequences:

>Translated_155_residues
MIASPKTVKSAMRSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETIGEPTIDSLVDDSGYYYVSSR
IKRFGPKEPEVVSRDLVAITFDGRGVVDSVQRYTLADGRAVPLERRVTDSNLEDKTFLRQLIGNLGNFNPSSFLQ
>Mature_155_residues
MIASPKTVKSAMRSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETIGEPTIDSLVDDSGYYYVSSR
IKRFGPKEPEVVSRDLVAITFDGRGVVDSVQRYTLADGRAVPLERRVTDSNLEDKTFLRQLIGNLGNFNPSSFLQ

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16946; Mature: 16946

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASPKTVKSAMRSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
GEPTIDSLVDDSGYYYVSSRIKRFGPKEPEVVSRDLVAITFDGRGVVDSVQRYTLADGRA
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHCCCCC
VPLERRVTDSNLEDKTFLRQLIGNLGNFNPSSFLQ
CCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MIASPKTVKSAMRSALLVGVLVAVTACTAQYRKHGWVPGPDLLNEVVVGVDTRDSVSETI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
GEPTIDSLVDDSGYYYVSSRIKRFGPKEPEVVSRDLVAITFDGRGVVDSVQRYTLADGRA
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHCCCCC
VPLERRVTDSNLEDKTFLRQLIGNLGNFNPSSFLQ
CCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA