| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080760
Identifier: 99080760
GI number: 99080760
Start: 979926
End: 980702
Strand: Direct
Name: 99080760
Synonym: TM1040_0919
Alternate gene names: NA
Gene position: 979926-980702 (Clockwise)
Preceding gene: 99080759
Following gene: 99080761
Centisome position: 30.61
GC content: 63.58
Gene sequence:
>777_bases ATGGCGATCCCTTCCCGGTCCCAATCTTCCGACCCAGCGCCGCGCGCAGGTGATCTTTTGTCCAAGGGGCGCTATTGCGC GCGTCTGGCGGCGAATGACGGTGATATCGCCGCCGCGCAGGCCCTGCGCACCTTGTGTTTTGGCACGCTGGATGTGGACC GGGACCATTTTGACGACAGCTGTGCCCATGTTCTGGTCGAAGAACGTGCAAGCGGCACGCTGGTCTGCTGCTTTCGCATG TTGGTGCTGGCGGGCGGGGGCGAGGTCGCGCGCACCTACTCGGCACAGTACTATGACCTTTCCGCATTGGCCGATTTCGA CGGGCGCATGGTGGAGATGGGGCGGTTTTGCATCCACCCGGACTGGAGCGATCCGGACATCCTGCGGGTTGCATGGGGCG CGATGACCAGCTTTGTGGACCGCGAGGAGATCCAGATGCTCTTTGGATGCTCGTCCTTCGCGGGAACAGAGACGGCGGTC TATCTGGATGCCTTTGCGATGCTCAAACACCGTCACCTGGCCCCCAAACGTTGGCTGCCCCGCGTCAAGGCCCCCGATGT GTTCCGCTTTGCCGCACGGCTGCGGCGCAAGCCTGACGCCAAGAAGGCGATGCTCCGGATGCCGCCCTTGCTGCGCACCT ATCTGATGATGGGCGGCTGGGTCAGCGATCACGCGGTGGTCGACCGGCATATGAACACGCTGCATGTGTTTACAGGGCTG GAAATCGGCGCGATTCCCCCTGCGCGCAAGCGTTTGCTGCGGGCGGTGGCGGGCTAG
Upstream 100 bases:
>100_bases AATTCGTCACCCGGGTTACACATGTTTTGTGCTAGCAAGAGCCGAGCGTGCCCCAAAAGCGGGGCGCGGCGCACAGAACA GAGACAGACACGAGCAGGCC
Downstream 100 bases:
>100_bases GCCGCGCCCCCCGGCGCCATGATACATTGACGAAGAGAGCGGCGCGGTTTAGCTCCGCTCTCATGGCACGTATTCCTCTT TTGCAGATGTCCGGGATTTC
Product: ornithine-acyl[acyl carrier protein] N-acyltransferase
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAIPSRSQSSDPAPRAGDLLSKGRYCARLAANDGDIAAAQALRTLCFGTLDVDRDHFDDSCAHVLVEERASGTLVCCFRM LVLAGGGEVARTYSAQYYDLSALADFDGRMVEMGRFCIHPDWSDPDILRVAWGAMTSFVDREEIQMLFGCSSFAGTETAV YLDAFAMLKHRHLAPKRWLPRVKAPDVFRFAARLRRKPDAKKAMLRMPPLLRTYLMMGGWVSDHAVVDRHMNTLHVFTGL EIGAIPPARKRLLRAVAG
Sequences:
>Translated_258_residues MAIPSRSQSSDPAPRAGDLLSKGRYCARLAANDGDIAAAQALRTLCFGTLDVDRDHFDDSCAHVLVEERASGTLVCCFRM LVLAGGGEVARTYSAQYYDLSALADFDGRMVEMGRFCIHPDWSDPDILRVAWGAMTSFVDREEIQMLFGCSSFAGTETAV YLDAFAMLKHRHLAPKRWLPRVKAPDVFRFAARLRRKPDAKKAMLRMPPLLRTYLMMGGWVSDHAVVDRHMNTLHVFTGL EIGAIPPARKRLLRAVAG >Mature_257_residues AIPSRSQSSDPAPRAGDLLSKGRYCARLAANDGDIAAAQALRTLCFGTLDVDRDHFDDSCAHVLVEERASGTLVCCFRML VLAGGGEVARTYSAQYYDLSALADFDGRMVEMGRFCIHPDWSDPDILRVAWGAMTSFVDREEIQMLFGCSSFAGTETAVY LDAFAMLKHRHLAPKRWLPRVKAPDVFRFAARLRRKPDAKKAMLRMPPLLRTYLMMGGWVSDHAVVDRHMNTLHVFTGLE IGAIPPARKRLLRAVAG
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28648; Mature: 28516
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPSRSQSSDPAPRAGDLLSKGRYCARLAANDGDIAAAQALRTLCFGTLDVDRDHFDDS CCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCHH CAHVLVEERASGTLVCCFRMLVLAGGGEVARTYSAQYYDLSALADFDGRMVEMGRFCIHP HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHHHCCCCHHHHHCCEEECC DWSDPDILRVAWGAMTSFVDREEIQMLFGCSSFAGTETAVYLDAFAMLKHRHLAPKRWLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCC RVKAPDVFRFAARLRRKPDAKKAMLRMPPLLRTYLMMGGWVSDHAVVDRHMNTLHVFTGL CCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECC EIGAIPPARKRLLRAVAG EECCCCHHHHHHHHHHCC >Mature Secondary Structure AIPSRSQSSDPAPRAGDLLSKGRYCARLAANDGDIAAAQALRTLCFGTLDVDRDHFDDS CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHCCHH CAHVLVEERASGTLVCCFRMLVLAGGGEVARTYSAQYYDLSALADFDGRMVEMGRFCIHP HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHHHCCCCHHHHHCCEEECC DWSDPDILRVAWGAMTSFVDREEIQMLFGCSSFAGTETAVYLDAFAMLKHRHLAPKRWLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCC RVKAPDVFRFAARLRRKPDAKKAMLRMPPLLRTYLMMGGWVSDHAVVDRHMNTLHVFTGL CCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECC EIGAIPPARKRLLRAVAG EECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA