| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080739
Identifier: 99080739
GI number: 99080739
Start: 959238
End: 959534
Strand: Reverse
Name: 99080739
Synonym: TM1040_0898
Alternate gene names: NA
Gene position: 959534-959238 (Counterclockwise)
Preceding gene: 99080742
Following gene: 99080738
Centisome position: 29.98
GC content: 46.8
Gene sequence:
>297_bases ATGGGTTGCATCCCCTACCAGCGCATCGGTGGCGGCTTCGGAAATACATGTGGAACTGTAAAGCGATATCTGAGCACCTG CGTGCTTTTGATCGAAACAGGTGGAGCTGACGAGACCCACGCTTTCACCGGCAAATGCACCTGTATTTTCTGCAATATCG GCAACGGTTTTCTTCAGAGCGCTCACGGGACTTCTCCTTCATTCAAAGTAATAGACACCCAAAACCTGCCACCTGAAAAA AATAAAACAAGAGAATTCCAACACCATGCGGATAAAAACGCATTCACTCTTCATTAA
Upstream 100 bases:
>100_bases TTAAATTGATCTTCGGCAACCCAACACAATTGGGTCACCGAAACGCATTTCAATCGAGACGGAGTAAAACTCAGCTCTCA ATGCAGGTCGAAGAGACCAT
Downstream 100 bases:
>100_bases TTTTTATTAACATCTAATTGATTCAAAAATGCAATTTCAGTTACCCACAATATTTGCACAGGTTTATTCACACGCGCAGT ATTGCAAAGCGAAATGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEK NKTREFQHHADKNAFTLH
Sequences:
>Translated_98_residues MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEK NKTREFQHHADKNAFTLH >Mature_97_residues GCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQSAHGTSPSFKVIDTQNLPPEKN KTREFQHHADKNAFTLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10651; Mature: 10520
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQS CCCCCCHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEEEEECCCCHHCC AHGTSPSFKVIDTQNLPPEKNKTREFQHHADKNAFTLH CCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECC >Mature Secondary Structure GCIPYQRIGGGFGNTCGTVKRYLSTCVLLIETGGADETHAFTGKCTCIFCNIGNGFLQS CCCCCHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCCCEEECCCEEEEEEECCCCHHCC AHGTSPSFKVIDTQNLPPEKNKTREFQHHADKNAFTLH CCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA