The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is ate

Identifier: 99080723

GI number: 99080723

Start: 941881

End: 942705

Strand: Reverse

Name: ate

Synonym: TM1040_0882

Alternate gene names: 99080723

Gene position: 942705-941881 (Counterclockwise)

Preceding gene: 99080724

Following gene: 99080722

Centisome position: 29.45

GC content: 61.21

Gene sequence:

>825_bases
ATGCGCCACACTCTACCGATCGCTCCTCAGTTCTATGTGACTGCGCCGCAGCCCTGCCCCTACCTTGAGGGCCGGATGGA
GCGCAAACTGTTCACCTCGCTGCAGGGCGACGGTGTGGAGCAGCTGAACAACTCGCTCAGCCAGCAGGGCTTTCGGCGCT
CGCAGAATGTGCTCTACCGTCCTTCCTGTTCCGACTGCTCGGCCTGCATGTCCGCACGCATCAGCGTTGCCGACTTCAAA
CCGACCCGCAGCCAGCGCAAGACGCTCAATCGCAACCGCCACCTGGACCGGCGCGCCACCTCGCCCTGGGCGACCGAGGA
TCAATACGCGCTGTTTCGAGACTATCTCGACCAGCGCCACGCCGACGGTGGCATGGCGGACATGGATGTCTTTGAATATG
CCGCCATGGTCGAGGAAACCCCGATCCGGACGCGGGTGGTGGAATACACCGACTTGGACACCAATGCGCTCACCGCTGTT
TCACTCACCGATGTGCTCGAAGACGGGCTGAGCATGGTCTATTCCTTCTATGCGCCCAACCTGCCGCAGAACTCGCTCGG
CACCTTCATGGTGCTTGATCACATCGAGATCGCGCGCGAGGCCGGGCTGCCCTATGTTTACCTGGGCTACTGGGTCCCTG
GCAGTCAGAAGATGGGGTACAAGGCCAAGTTCTCCGGCCTTGAAGTCTATTTCGGCGGCGAATGGACTCCCTTGAAGGAC
CCCGAAAGCTTTACCGCCGAGGATCACCCTCTCTCTACCGCGCCGGTGGCCGAGCAGGTGGCCAATATCCAGCTGCCGCA
GGGTACCTCCCCCAAAAAAAGGTAA

Upstream 100 bases:

>100_bases
ACCGGGTCGGTCGCTATCATCACATATTCAACGACACTGATGCCGGGCCGTCCAAGAGGGACGGTCCTTCCTACGTTTAC
GAGAGCCGCTGACCTCACAT

Downstream 100 bases:

>100_bases
ACCGCGTGCAATTTCTCCACGCCGTCTCCCTTGTGGTGCCCGATTACGACGCGGCCATTGCGTTTTACTGCCAGACACTT
GGCTGGACCCTGGCCGAAGA

Product: arginyl-tRNA-protein transferase

Products: NA

Alternate protein names: Arginyltransferase; R-transferase

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK
PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV
SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD
PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR

Sequences:

>Translated_274_residues
MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK
PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV
SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD
PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR
>Mature_274_residues
MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYRPSCSDCSACMSARISVADFK
PTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRHADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAV
SLTDVLEDGLSMVYSFYAPNLPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD
PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR

Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)

COG id: COG2935

COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the R-transferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATE_SILST (Q1GIA1)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612877.1
- STRING:   Q1GIA1
- GeneID:   4075979
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0882
- NMPDR:   fig|292414.1.peg.2966
- eggNOG:   COG2935
- HOGENOM:   HBG651116
- OMA:   PQFYLTA
- ProtClustDB:   PRK01305
- BioCyc:   SSP292414:TM1040_0882-MONOMER
- GO:   GO:0005737
- GO:   GO:0006412
- HAMAP:   MF_00689
- InterPro:   IPR016181
- InterPro:   IPR007472
- InterPro:   IPR017138
- InterPro:   IPR007471
- PIRSF:   PIRSF037208

Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase

EC number: =2.3.2.8

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYR
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC
PSCSDCSACMSARISVADFKPTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRH
CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHC
ADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAVSLTDVLEDGLSMVYSFYAPN
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD
CCCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCC
PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRHTLPIAPQFYVTAPQPCPYLEGRMERKLFTSLQGDGVEQLNNSLSQQGFRRSQNVLYR
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC
PSCSDCSACMSARISVADFKPTRSQRKTLNRNRHLDRRATSPWATEDQYALFRDYLDQRH
CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHC
ADGGMADMDVFEYAAMVEETPIRTRVVEYTDLDTNALTAVSLTDVLEDGLSMVYSFYAPN
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPQNSLGTFMVLDHIEIAREAGLPYVYLGYWVPGSQKMGYKAKFSGLEVYFGGEWTPLKD
CCCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCCCC
PESFTAEDHPLSTAPVAEQVANIQLPQGTSPKKR
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA