Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99080722

Identifier: 99080722

GI number: 99080722

Start: 941492

End: 941875

Strand: Reverse

Name: 99080722

Synonym: TM1040_0881

Alternate gene names: NA

Gene position: 941875-941492 (Counterclockwise)

Preceding gene: 99080723

Following gene: 99080718

Centisome position: 29.42

GC content: 64.84

Gene sequence:

>384_bases
GTGCAATTTCTCCACGCCGTCTCCCTTGTGGTGCCCGATTACGACGCGGCCATTGCGTTTTACTGCCAGACACTTGGCTG
GACCCTGGCCGAAGATGTGGATCAGGGCCGCAAGCGCTGGGTGCGCATTCTGCCGCCGGGCGCCACTGCGGGCAGTCTGA
TCCTCGCACGCGCCGAGGGCCCTGCCCAGGAGGCCGCCATCGGCAACCAGTTTGGCGGACGGGTCGGGCTCTTCCTGGCA
ACGGATGATTTTGCCCGCGATCACCGCGCCATGACCGCCGCCGGTGTCCTCTTTGAGGAGGCCCCGCGAGTTGAGCCATA
TGGTACCGTTGCAGTCTGGCGCGACCCTTTTGGCAATCGCTGGGACCTGATCCAGTTCGCCTAG

Upstream 100 bases:

>100_bases
TTACCGCCGAGGATCACCCTCTCTCTACCGCGCCGGTGGCCGAGCAGGTGGCCAATATCCAGCTGCCGCAGGGTACCTCC
CCCAAAAAAAGGTAAACCGC

Downstream 100 bases:

>100_bases
GTGCCACCACGCCTGCCGTCCCGGATCTGCACAACCTGTGTGCGGGGCCAAACCGCCCTTCAAGGGCGCTCTCTACCTTC
TTCTAACTCAAAATATCCCG

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MQFLHAVSLVVPDYDAAIAFYCQTLGWTLAEDVDQGRKRWVRILPPGATAGSLILARAEGPAQEAAIGNQFGGRVGLFLA
TDDFARDHRAMTAAGVLFEEAPRVEPYGTVAVWRDPFGNRWDLIQFA

Sequences:

>Translated_127_residues
MQFLHAVSLVVPDYDAAIAFYCQTLGWTLAEDVDQGRKRWVRILPPGATAGSLILARAEGPAQEAAIGNQFGGRVGLFLA
TDDFARDHRAMTAAGVLFEEAPRVEPYGTVAVWRDPFGNRWDLIQFA
>Mature_127_residues
MQFLHAVSLVVPDYDAAIAFYCQTLGWTLAEDVDQGRKRWVRILPPGATAGSLILARAEGPAQEAAIGNQFGGRVGLFLA
TDDFARDHRAMTAAGVLFEEAPRVEPYGTVAVWRDPFGNRWDLIQFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywkD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 13936; Mature: 13936

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLHAVSLVVPDYDAAIAFYCQTLGWTLAEDVDQGRKRWVRILPPGATAGSLILARAEG
CCHHHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCC
PAQEAAIGNQFGGRVGLFLATDDFARDHRAMTAAGVLFEEAPRVEPYGTVAVWRDPFGNR
CHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
WDLIQFA
CCEEEEC
>Mature Secondary Structure
MQFLHAVSLVVPDYDAAIAFYCQTLGWTLAEDVDQGRKRWVRILPPGATAGSLILARAEG
CCHHHEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCC
PAQEAAIGNQFGGRVGLFLATDDFARDHRAMTAAGVLFEEAPRVEPYGTVAVWRDPFGNR
CHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
WDLIQFA
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]