The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is yitW [H]

Identifier: 99080607

GI number: 99080607

Start: 822118

End: 822480

Strand: Reverse

Name: yitW [H]

Synonym: TM1040_0766

Alternate gene names: 99080607

Gene position: 822480-822118 (Counterclockwise)

Preceding gene: 99080608

Following gene: 99080606

Centisome position: 25.69

GC content: 56.75

Gene sequence:

>363_bases
ATGACTGACGCTTCCGAACCGCTTGAAGGCACTCCGCTGATTGCGCCCTCCTCCGTGTCCCACGCGCTCTATGAGCCAGT
GGTTGATGCCTGCCGTACTGTTTTTGACCCAGAGATCCCGGTCAACATCTATGATCTTGGGCTGATCTACACTGTTGAAA
TTTCTGATGAAAACGACGTCAAAATCATCATGACCCTGACCGCCCCTGGCTGTCCGGTGGCAGGCGATATGCCCGGCTGG
ATCGTCGATGCGGTCTCGCCCGTGCCCGGTGTCAAAAGCGTCGATGTGGAACTCACCTGGGAACCGCCCTGGGGCATGGA
CATGATGTCGGATGAAGCCCGACTGGAACTCGGGTTCATGTAA

Upstream 100 bases:

>100_bases
CCCCTTCAAAACCACTGCACGCGCGTGAATCGACCGCGATCTCTGGACCCTGCCTGCAGGTTTCCCTATATAAAACCTCA
GATAACTGACCGAGGCTTGA

Downstream 100 bases:

>100_bases
CCATGACCTGCGCTCGCAGGATCGTGATCTGAGACTGTCGCCTTTCCCTGACATCCGTGCCCCTTGATGGGCTACGCCAC
ACCACCTAGGTTACAGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTDASEPLEGTPLIAPSSVSHALYEPVVDACRTVFDPEIPVNIYDLGLIYTVEISDENDVKIIMTLTAPGCPVAGDMPGW
IVDAVSPVPGVKSVDVELTWEPPWGMDMMSDEARLELGFM

Sequences:

>Translated_120_residues
MTDASEPLEGTPLIAPSSVSHALYEPVVDACRTVFDPEIPVNIYDLGLIYTVEISDENDVKIIMTLTAPGCPVAGDMPGW
IVDAVSPVPGVKSVDVELTWEPPWGMDMMSDEARLELGFM
>Mature_119_residues
TDASEPLEGTPLIAPSSVSHALYEPVVDACRTVFDPEIPVNIYDLGLIYTVEISDENDVKIIMTLTAPGCPVAGDMPGWI
VDAVSPVPGVKSVDVELTWEPPWGMDMMSDEARLELGFM

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 12980; Mature: 12849

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDASEPLEGTPLIAPSSVSHALYEPVVDACRTVFDPEIPVNIYDLGLIYTVEISDENDV
CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCE
KIIMTLTAPGCPVAGDMPGWIVDAVSPVPGVKSVDVELTWEPPWGMDMMSDEARLELGFM
EEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TDASEPLEGTPLIAPSSVSHALYEPVVDACRTVFDPEIPVNIYDLGLIYTVEISDENDV
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCE
KIIMTLTAPGCPVAGDMPGWIVDAVSPVPGVKSVDVELTWEPPWGMDMMSDEARLELGFM
EEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]