Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is glmU
Identifier: 99080569
GI number: 99080569
Start: 785636
End: 786985
Strand: Reverse
Name: glmU
Synonym: TM1040_0728
Alternate gene names: 99080569
Gene position: 786985-785636 (Counterclockwise)
Preceding gene: 99080571
Following gene: 99080568
Centisome position: 24.59
GC content: 62.52
Gene sequence:
>1350_bases ATGAGCACTGCCCTCGTCATCCTCGCCGCAGGCAAAGGCACCAGGATGAACTCCGATTTGCCCAAAGTCCTGCATCAGAT CGCACATGCGCCGATGCTGGAACATGCGATGCGCGCCGGGGGGGCGCTTGACCCCGAGCGCACGGTGGTTGTGGCAGGCC ACGAGGCCGAGATGGTGCGCGCGGCCACCGCAGAGATCGCCCCTGAAGCGACAGTGGTGCTGCAGGAAGAGCAGCTCGGC ACCGGCCACGCGGTACTTCAAGCGCGCGCGGCACTCGAGGGATTTCGCGGCGATGTCGTGGTGCTCTATGGCGATACGCC TTTTGTGTCGGCCGAGACGCTGGAACGCATGATCGAAGCGCGCAGCCGCGCCGATCTAGTGATCCTCGGCTTTGAAGCCG CCGATCCTGCGCGCTACGGCCGGTTGATCATGCAGGGCGAAAGCCTTGAGAAAATCGTCGAGTTCAAGGACGCAAGCGAC GCCGAGCGCGCGATTACATTCTGCAACTCGGGCCTCATGGCGTGCAACGCCGAGGTGATGTTTGGCCTGCTTGATCAAGT GGGCAACGACAATGCCTCTGGCGAATACTACCTGACCGATCTTGTCGAACTCGCGCGGGCCGAGGGGCTGAGCGTCACGG CCGTGTCCTGCCCCGAAGCGGAAACGCTCGGCATCAATTCCCGCGCGGACCTCGCGGCCGCGGAGGCGGTGTTTCAGGCG CATGCGCGGGCTGAGTTGTTGGACATCGGCGTCACGCTGACGGCTCCTGAGACCGTCCATCTGGCCTTTGACACCATCAT TGGTCGTGACACGGTGATTGAACCCAATGTGGTCTTTGGTCCCGGTGTCACCGTTGAGAGCGGCGCTTTGATCCGGGCGT TTTCGCACCTTGAGGGCTGCCATGTGTCGCGTGGCGCCAAGGTCGGCCCCTACGCCCGCCTGCGCCCCGGCGCGGAGCTG GCCGAGGACACCCATGTGGGCAACTTCGTTGAAATCAAGAACGCTGAGATCGCCGCAGGCGCCAAGGTGAACCACCTGAC CTATATTGGCGATGCCTCTGTGGGTGAGGCGACGAATATCGGAGCGGGCACAATCACCTGCAACTACGATGGCGTCATGA AGCATCGCACCGAAATCGGCGCGCGCGCCTTTATCGGATCAAACACGTGTTTGGTCGCCCCGGTGACCGTTGGCGATGAG GCGATGACGGCAACAGGTGCTGTCATCACCAAGGATGTCGCTGATGGAGATCTGGCGATTGCGCGCGTCCAGCAGACGAA CAAACCAGGCCGCGCACGCAAGCTGATGGATATGCTGCGCGCCAAGAAAGCCGCAAAGGCCAAAGGGTAA
Upstream 100 bases:
>100_bases GATGTTGCAAGTCGCAACTGAAGTTTATGGCAGCGCATCTTGCGCATCCTCTGTTAGCGGATAGAACGGGGGCAACAAAA ACTCAAAGGGAAAACACCCC
Downstream 100 bases:
>100_bases TCACATGTGTGGAATTATCGGAGTTCTGGGCAACCATGAAGTCTCGCCCATTTTGGTCGAAGCGCTGAAACGGCTGGAAT ATCGCGGATATGACAGTGCA
Product: bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSTALVILAAGKGTRMNSDLPKVLHQIAHAPMLEHAMRAGGALDPERTVVVAGHEAEMVRAATAEIAPEATVVLQEEQLG TGHAVLQARAALEGFRGDVVVLYGDTPFVSAETLERMIEARSRADLVILGFEAADPARYGRLIMQGESLEKIVEFKDASD AERAITFCNSGLMACNAEVMFGLLDQVGNDNASGEYYLTDLVELARAEGLSVTAVSCPEAETLGINSRADLAAAEAVFQA HARAELLDIGVTLTAPETVHLAFDTIIGRDTVIEPNVVFGPGVTVESGALIRAFSHLEGCHVSRGAKVGPYARLRPGAEL AEDTHVGNFVEIKNAEIAAGAKVNHLTYIGDASVGEATNIGAGTITCNYDGVMKHRTEIGARAFIGSNTCLVAPVTVGDE AMTATGAVITKDVADGDLAIARVQQTNKPGRARKLMDMLRAKKAAKAKG
Sequences:
>Translated_449_residues MSTALVILAAGKGTRMNSDLPKVLHQIAHAPMLEHAMRAGGALDPERTVVVAGHEAEMVRAATAEIAPEATVVLQEEQLG TGHAVLQARAALEGFRGDVVVLYGDTPFVSAETLERMIEARSRADLVILGFEAADPARYGRLIMQGESLEKIVEFKDASD AERAITFCNSGLMACNAEVMFGLLDQVGNDNASGEYYLTDLVELARAEGLSVTAVSCPEAETLGINSRADLAAAEAVFQA HARAELLDIGVTLTAPETVHLAFDTIIGRDTVIEPNVVFGPGVTVESGALIRAFSHLEGCHVSRGAKVGPYARLRPGAEL AEDTHVGNFVEIKNAEIAAGAKVNHLTYIGDASVGEATNIGAGTITCNYDGVMKHRTEIGARAFIGSNTCLVAPVTVGDE AMTATGAVITKDVADGDLAIARVQQTNKPGRARKLMDMLRAKKAAKAKG >Mature_448_residues STALVILAAGKGTRMNSDLPKVLHQIAHAPMLEHAMRAGGALDPERTVVVAGHEAEMVRAATAEIAPEATVVLQEEQLGT GHAVLQARAALEGFRGDVVVLYGDTPFVSAETLERMIEARSRADLVILGFEAADPARYGRLIMQGESLEKIVEFKDASDA ERAITFCNSGLMACNAEVMFGLLDQVGNDNASGEYYLTDLVELARAEGLSVTAVSCPEAETLGINSRADLAAAEAVFQAH ARAELLDIGVTLTAPETVHLAFDTIIGRDTVIEPNVVFGPGVTVESGALIRAFSHLEGCHVSRGAKVGPYARLRPGAELA EDTHVGNFVEIKNAEIAAGAKVNHLTYIGDASVGEATNIGAGTITCNYDGVMKHRTEIGARAFIGSNTCLVAPVTVGDEA MTATGAVITKDVADGDLAIARVQQTNKPGRARKLMDMLRAKKAAKAKG
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-GlcNAc. Responsible for the acetylation of Glc-N-1-P to give GlcNAc-1-P and for the uridyl transfer from UTP to GlcNAc-1-P which produces UDP-GlcNAc
COG id: COG1207
COG function: function code M; N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family
Homologues:
Organism=Escherichia coli, GI1790168, Length=449, Percent_Identity=42.7616926503341, Blast_Score=336, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMU_SILST (Q1GIQ5)
Other databases:
- EMBL: CP000377 - RefSeq: YP_612723.1 - ProteinModelPortal: Q1GIQ5 - SMR: Q1GIQ5 - STRING: Q1GIQ5 - GeneID: 4076098 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_0728 - NMPDR: fig|292414.1.peg.2833 - eggNOG: COG1207 - HOGENOM: HBG688195 - OMA: GSKVNHL - PhylomeDB: Q1GIQ5 - ProtClustDB: PRK14353 - BioCyc: SSP292414:TM1040_0728-MONOMER - GO: GO:0005737 - HAMAP: MF_01631 - InterPro: IPR005882 - InterPro: IPR005835 - InterPro: IPR011004 - TIGRFAMs: TIGR01173
Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like
EC number: =2.7.7.23; =2.3.1.157
Molecular weight: Translated: 47193; Mature: 47062
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: ACT_SITE 345-345 BINDING 75-75 BINDING 140-140 BINDING 154-154 BINDING 169-169 BINDING 369-369 BINDING 387-387 BINDING 422-422
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALVILAAGKGTRMNSDLPKVLHQIAHAPMLEHAMRAGGALDPERTVVVAGHEAEMVR CCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHH AATAEIAPEATVVLQEEQLGTGHAVLQARAALEGFRGDVVVLYGDTPFVSAETLERMIEA HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH RSRADLVILGFEAADPARYGRLIMQGESLEKIVEFKDASDAERAITFCNSGLMACNAEVM HCCCCEEEEEECCCCHHHHCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCEEECHHHH FGLLDQVGNDNASGEYYLTDLVELARAEGLSVTAVSCPEAETLGINSRADLAAAEAVFQA HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHH HARAELLDIGVTLTAPETVHLAFDTIIGRDTVIEPNVVFGPGVTVESGALIRAFSHLEGC HHHHEEEEEEEEEECCCEEEEEEHHHCCCCCEECCCEEECCCCEECCCHHHHHHHHCCCC HVSRGAKVGPYARLRPGAELAEDTHVGNFVEIKNAEIAAGAKVNHLTYIGDASVGEATNI CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCEEECCCEEEEEEEECCCCCCCCCCC GAGTITCNYDGVMKHRTEIGARAFIGSNTCLVAPVTVGDEAMTATGAVITKDVADGDLAI CCEEEEECCCCHHHHHHHHCCEEEECCCCEEEEEEEECCCHHCCCCCEEEECCCCCCEEE ARVQQTNKPGRARKLMDMLRAKKAAKAKG EEEHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STALVILAAGKGTRMNSDLPKVLHQIAHAPMLEHAMRAGGALDPERTVVVAGHEAEMVR CCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHH AATAEIAPEATVVLQEEQLGTGHAVLQARAALEGFRGDVVVLYGDTPFVSAETLERMIEA HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH RSRADLVILGFEAADPARYGRLIMQGESLEKIVEFKDASDAERAITFCNSGLMACNAEVM HCCCCEEEEEECCCCHHHHCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCEEECHHHH FGLLDQVGNDNASGEYYLTDLVELARAEGLSVTAVSCPEAETLGINSRADLAAAEAVFQA HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHH HARAELLDIGVTLTAPETVHLAFDTIIGRDTVIEPNVVFGPGVTVESGALIRAFSHLEGC HHHHEEEEEEEEEECCCEEEEEEHHHCCCCCEECCCEEECCCCEECCCHHHHHHHHCCCC HVSRGAKVGPYARLRPGAELAEDTHVGNFVEIKNAEIAAGAKVNHLTYIGDASVGEATNI CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCEEECCCEEEEEEEECCCCCCCCCCC GAGTITCNYDGVMKHRTEIGARAFIGSNTCLVAPVTVGDEAMTATGAVITKDVADGDLAI CCEEEEECCCCHHHHHHHHCCEEEECCCCEEEEEEEECCCHHCCCCCEEEECCCCCCEEE ARVQQTNKPGRARKLMDMLRAKKAAKAKG EEEHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA